Gene omics information

Query gene ID At1g67210
Gene name proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6378.1At1g67210843041proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPOFVS.X.H.G.
1.00100.0At1g33220840216beta-1,3-glucanase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;POS.X.H.G.
1.00100.0At5g20370832159serine-rich protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9195.6At2g120503768039-F:unknown;P:unknown;C:unknownS.X.H.G.
0.9195.6At3g56530824820anac064 (Arabidopsis NAC domain containing protein 64)F:transcription factor activity;P:regulation of transcription;C:unknown;PS.X.H.G.
0.9195.6At3g59790825148ATMPK10member of MAP KinaseS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1965.1100.0GSM133773Lindsey_1-25_torpedo-meristem_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
80.299.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
76.899.9GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
71.899.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
67.499.8GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
62.599.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
56.299.8GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
56.299.8GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
55.099.8GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
54.699.8GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.432e-77289At5g38600833850proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinF:zinc ion binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.011e-242At1g33610840255protein bindingF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAVC.G.S.X.
0.034e-240At2g17240816229unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMBPFVC.G.S.X.
0.014e-240At1g75220843859integral membrane protein, putativeF:carbohydrate transmembrane transporter activity, sugar:hydrogen symporter activity;P:transport, transmembrane transport;C:plasma membrane, membrane;BMFPOAVC.G.S.X.
0.022e-138At5g62380836359ANAC101 (ARABIDOPSIS NAC-DOMAIN PROTEIN 101)Encodes a NAC-domain transcription factor involved in xylem formation. Induces transdifferentiation of various cells into metaxylem vessel elements. Located in the nucleus. Expression induced in the presence of auxin, cytokinin and brassinosteroids.C.G.S.X.
0.012e-138At5g614508362662-phosphoglycerate kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:chloroplast;OMAPFBC.G.S.X.
0.022e-138At3g46880823841unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PC.G.S.X.
0.012e-138At3g45850823728kinesin motor protein-relatedF:microtubule motor activity, ATP binding;P:microtubule-based movement;C:plasma membrane;MOBFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.053e-344Glycine maxGmaAffx.67734.1.S1_atBF594968--1e-6At5g38600proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.023e-136Hordeum vulgareEBro03_SQ005_I09_atEBro03_SQ005_I09--8e-1At1g50720stigma-specific Stig1 family proteinC.G.S.X.
0.021e+036Oryza sativaOs02g0178700AK110943.1-Basic helix-loop-helix dimerisation region bHLHdomain containing protein5e-1At2g40475unknown proteinC.G.S.X.
0.151e-1275Populus trichocarpaPtpAffx.215436.1.S1_atpmrna29626hypothetical protein-5e-13At1g67210proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.023e+034Triticum aestivumTaAffx.29109.1.S1_atCA650117--9e-1At1g26600CLE9 (CLAVATA3/ESR-RELATED 9)C.G.S.X.
0.023e-342Vitis vinifera1621262_atCD008912--6e-3At1g67210proline-rich spliceosome-associated (PSP) family protein / zinc knuckle (CCHC-type) family proteinC.G.S.X.
0.033e-136Zea maysZmAffx.873.1.A1_atAI770779--5e-2At4g30460glycine-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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