CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g67110

Gene name CYP735A2

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.49 63.5 At1g67110 843031 CYP735A2 member of CYP709A S.X. H.G.
0.54 69.5 At5g43180 834336 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PBO S.X. H.G.
0.52 67.4 At2g04800 815024 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P S.X. H.G.
0.49 63.5 At5g10210 830885 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.42 53.9 At5g25890 832658 IAA28 (INDOLE-3-ACETIC ACID INDUCIBLE 28) encodes a protein that may be a negative regulator of lateral root formation in response to auxin. It is a member of IAA/ARF gene family and is plant-specific. Gain of function mutations in this gene suppresses lateral root formation and is resistant to inhibition of root elongation by auxin, cytokinin, and ethylene. S.X. H.G.
0.41 52.4 At3g23430 821924 PHO1 (phosphate 1) mutant is deficient in the transfer of phosphate from root epidermal and cortical cells to the xylem. encodes protein with the mainly hydrophilic N-terminal and the C-terminal containing 6 potential membrane-spanning domains. S.X. H.G.
0.39 48.4 At1g18880 838469 proton-dependent oligopeptide transport (POT) family protein F:transporter activity;P:oligopeptide transport;C:membrane;PMBFO S.X. H.G.
0.39 48.4 At4g30460 829169 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVA S.X. H.G.
0.38 46.7 At1g20160 838606 ATSBT5.2 F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:apoplast;BPOFMA S.X. H.G.
0.37 45.0 At4g30450 829168 glycine-rich protein F:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
147.7 99.9 GSM291024 root - 08% oxygen - 48h - A GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
120.1 99.9 GSM142635 MC002_ATH1_A5.1-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
116.4 99.9 GSM291119 root - 21% oxygen - 48h - A GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
109.2 99.9 GSM142637 MC002_ATH1_A5.3-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
96.1 99.9 E-ATMX-31-raw-cel-1516948001
81.4 99.9 E-ATMX-31-raw-cel-1516947984
74.0 99.9 GSM142636 MC002_ATH1_A5.2-dubos-5kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
60.4 99.8 GSM142631 MC002_ATH1_A3.3-dubos-6kx GSE6151 The mechanisms involved in the interplay between dormancy and secondary growth in Arabidopsis
51.3 99.8 E-MEXP-828-raw-cel-1156922794
48.1 99.8 E-ATMX-3-raw-cel-1161357954
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.46 1e-36 155 At5g38450 833833 CYP735A1 member of CYP709A C.G. S.X.
0.01 2e-1 38 At5g56040 835702 leucine-rich repeat protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.01 8e-1 36 At5g44316 834456 ATP-binding-cassette transporter, putative F:protein binding;P:iron-sulfur cluster assembly;C:unknown;OBAPM C.G. S.X.
0.01 8e-1 36 At4g04770 825814 ATABC1 (ATP BINDING CASSETTE PROTEIN 1) Encodes an iron-stimulated ATPase. A member of the NAP subfamily of ABC transporters. Involved in Fe-S cluster assembly. Similar to SufB. Involved in the regulation of iron homeostasis. Able to form homodimers. Interacts with AtNAP7 inside the chloroplast. C.G. S.X.
0.02 8e-1 36 At3g14680 820696 CYP72A14 putative cytochrome P450 C.G. S.X.
0.01 8e-1 36 At3g58520 825021 ubiquitin thiolesterase F:ubiquitin thiolesterase activity;P:ubiquitin-dependent protein catabolic process;C:intracellular;P C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 3e-1 38 Glycine max HgAffx.15832.1.S1_at CB281162 - - 6e-1 At5g41530 - C.G. S.X.
0.03 2e+0 34 Hordeum vulgare Contig1186_at Contig1186 - - 8e+0 At5g05120 zinc finger (C2H2 type) family protein C.G. S.X.
0.03 6e-6 54 Oryza sativa Os03g0371400 AK107816.1 - Cytochrome P450 family protein 4e+0 At4g37810 unknown protein C.G. S.X.
0.03 3e-4 48 Populus trichocarpa PtpAffx.210735.1.S1_at pmrna21061 cytochrome P450 - 8e-4 At5g52400 CYP715A1 C.G. S.X.
0.02 5e-2 40 Triticum aestivum Ta.4925.3.S1_a_at BJ269072 - - 4e+0 At5g50720 ATHVA22E C.G. S.X.
0.01 9e-1 34 Vitis vinifera 1620975_at BQ798236 hypothetical protein LOC100258366 - 7e-55 At1g11890 SEC22 C.G. S.X.
0.01 1e+0 34 Zea mays Zm.9389.1.A1_a_at CO524440 catalytic/ protein phosphatase type 2C - 6e+0 At5g56710 60S ribosomal protein L31 (RPL31C) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00908 Zeatin biosynthesis
01070 Biosynthesis of plant hormones
01100 Metabolic pathways
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