CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g67030

Gene name ZFP6 (ZINC FINGER PROTEIN 6)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.44 57.2 At1g67030 843022 ZFP6 (ZINC FINGER PROTEIN 6) Encodes a zinc finger protein containing only a single zinc finger. S.X. H.G.
0.50 65.3 At5g44920 834522 Toll-Interleukin-Resistance (TIR) domain-containing protein F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBO S.X. H.G.
0.40 50.8 At5g59530 836072 2-oxoglutarate-dependent dioxygenase, putative F:transferase activity, transferring glycosyl groups;P:unknown;C:unknown;POBFM S.X. H.G.
0.32 35.7 At2g04800 815024 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;P S.X. H.G.
0.28 30.3 At4g14465 827093 DNA-binding protein-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBM S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
81.3 99.9 E-MEXP-1112-raw-cel-1590665793
74.9 99.9 E-MEXP-1112-raw-cel-1590665377
52.5 99.8 GSM131170 AtGen_D-2_1-FL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
48.4 99.8 E-MEXP-828-raw-cel-1156922296
46.1 99.8 E-MEXP-1112-raw-cel-1590665429
39.7 99.8 GSM131185 AtGen_D-18_2-FL_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
38.6 99.8 GSM131203 AtGen_D-37_3-BL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
37.6 99.7 GSM131200 AtGen_D-34_3-FL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
36.8 99.7 GSM131196 AtGen_D-30_2-AS_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
35.0 99.7 E-MEXP-1112-raw-cel-1590665845
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.14 6e-27 121 At1g68360 843165 zinc finger protein-related F:transcription factor activity;P:regulation of transcription;C:intracellular;PMO C.G. S.X.
0.10 3e-10 65 At1g10480 837588 ZFP5 (ZINC FINGER PROTEIN 5) Encodes a zinc finger protein containing only a single zinc finger. C.G. S.X.
0.06 8e-8 57 At5g57520 835856 ZFP2 (ZINC FINGER PROTEIN 2) Encodes a zinc finger protein containing only a single zinc finger. C.G. S.X.
0.05 3e-7 56 At1g66140 842928 ZFP4 (ZINC FINGER PROTEIN 4) Encodes a zinc finger protein containing only a single zinc finger. C.G. S.X.
0.06 1e-6 54 At5g25160 832587 ZFP3 (ZINC FINGER PROTEIN 3) Encodes a zinc finger protein containing only a single zinc finger. C.G. S.X.
0.06 1e-6 54 At5g14010 831249 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular, chloroplast;P C.G. S.X.
0.06 2e-5 50 At1g24625 839077 ZFP7 (ZINC FINGER PROTEIN 7) Encodes a zinc finger protein containing only a single zinc finger. C.G. S.X.
0.04 1e-3 44 At5g10970 830964 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular;P C.G. S.X.
0.06 5e-3 42 At5g27880 832851 zinc finger (C2H2 type) family protein F:transcription factor activity, zinc ion binding, nucleic acid binding;P:regulation of transcription;C:intracellular, chloroplast;PMO C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.15 1e-7 57 Glycine max GmaAffx.70292.1.S1_at AW101778 - - 1e-7 At1g67030 ZFP6 (ZINC FINGER PROTEIN 6) C.G. S.X.
0.04 1e-1 36 Hordeum vulgare Contig22860_at Contig22860 - - 4e-1 At1g67030 ZFP6 (ZINC FINGER PROTEIN 6) C.G. S.X.
0.04 4e-2 40 Oryza sativa Os.52094.1.S1_at - - - 0 C.G. S.X.
0.13 7e-9 61 Populus trichocarpa PtpAffx.113981.1.A1_at CV276195 hypothetical protein - 4e-8 At1g67030 ZFP6 (ZINC FINGER PROTEIN 6) C.G. S.X.
0.04 3e-1 36 Triticum aestivum TaAffx.8104.1.S1_at CA694166 - - 3e-1 At5g48890 transcription factor C.G. S.X.
0.03 5e+0 30 Vitis vinifera 1618112_at CB971725 hypothetical protein LOC100264656 - 6e-2 At5g03490 UDP-glucoronosyl/UDP-glucosyl transferase family protein C.G. S.X.
0.03 5e-1 34 Zea mays Zm.13385.1.A1_at Y12762.1 hypothetical LOC542461 - 8e-1 At1g21864 - C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0045449 Any process that modulates the frequency, rate or extent of the synthesis of either RNA on a template of DNA or DNA on a template of RNA.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage