CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g66880

Gene name serine/threonine protein kinase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.20 14.4 At1g66880 843006 serine/threonine protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;MPOBFVA S.X. H.G.
0.42 53.9 At3g56400 824807 WRKY70 member of WRKY Transcription Factor; Group III. Function as activator of SA-dependent defense genes and a repressor of JA-regulated genes. WRKY70-controlled suppression of JA-signaling is partly executed by NPR1. S.X. H.G.
0.40 50.8 At5g60900 836211 RLK1 (RECEPTOR-LIKE PROTEIN KINASE 1) Encodes a receptor-like protein kinase. S.X. H.G.
0.35 41.6 At2g37710 818348 RLK (receptor lectin kinase) Induced in response to Salicylic acid. S.X. H.G.
0.33 38.1 At1g21250 838721 WAK1 (CELL WALL-ASSOCIATED KINASE) cell wall-associated kinase, may function as a signaling receptor of extracellular matrix component. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
43.0 99.8 E-MEXP-546-raw-cel-863289586
37.4 99.7 E-MEXP-739-raw-cel-1099467330
35.4 99.7 E-MEXP-173-raw-cel-357965452
35.3 99.7 E-MEXP-739-raw-cel-1099467312
34.1 99.7 GSM322555 genotype: ataf1-1 mutant, ecotype Col-0 - treated or untreated: Bgh inoculated - rep2 GSE12856 Penetration resistance: Wildtype and ataf1-1 mutant response to Bgh 12 h after inoculation, 2*2 factorial design
33.5 99.7 E-MEXP-739-raw-cel-1099467303
32.2 99.7 GSM244455 Arabidopsis AtMYB30-ox_6 h_ Xanthomonas inoculated_biological rep1_exp1 GSE9674 Expression data from Arabidopsis plants misexpressing AtMYB30 after Xanthomonas inoculation at early timepoints
31.4 99.7 E-MEXP-546-raw-cel-863289424
28.3 99.7 GSM264762 Tween 0.1% 2h GSE10464 Expression data from Arabidopsis thaliana (Ler) rosette leaves treated with paraquat (methyl viologen)
26.3 99.7 GSM128671 Underwood_1-24_hrpAfliC-10e8-7h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.24 2e-89 331 At5g38210 833803 serine/threonine protein kinase family protein F:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.13 2e-46 188 At1g66910 843009 protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.20 1e-38 163 At1g66940 843012 protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PM C.G. S.X.
0.19 5e-35 151 At1g67000 843018 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.03 5e-32 141 At1g66860 843004 hydrolase F:hydrolase activity;P:glutamine metabolic process, N-terminal protein myristoylation;C:cellular_component unknown;BOPAF C.G. S.X.
0.07 4e-20 101 At1g66930 843011 serine/threonine protein kinase family protein F:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA C.G. S.X.
0.08 4e-20 101 At1g66920 843010 serine/threonine protein kinase, putative F:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.01 7e-1 38 Glycine max HgAffx.7327.1.S1_at CB824884 - - 1e+0 At2g38600 acid phosphatase class B family protein C.G. S.X.
0.01 2e-5 52 Hordeum vulgare Contig15404_at Contig15404 - - 1e-3 At1g78980 SRF5 (STRUBBELIG-RECEPTOR FAMILY 5) C.G. S.X.
0.02 4e-9 65 Oryza sativa Os01g0689900 AK100606.1 - Protein kinase domain containing protein 2e-5 At1g48210 serine/threonine protein kinase, putative C.G. S.X.
0.03 2e-1 40 Populus trichocarpa PtpAffx.224653.1.S1_s_at pmrna43402 hypothetical protein - 1e-23 At1g25390 protein kinase family protein C.G. S.X.
0.01 1e-1 40 Triticum aestivum TaAffx.113604.1.S1_at CA608738 - - 3e-1 At1g65490 unknown protein C.G. S.X.
0.01 4e-5 50 Vitis vinifera 1614528_at CB973367 hypothetical protein LOC100253189 - 2e-5 At1g15040 glutamine amidotransferase-related C.G. S.X.
0.01 3e-3 44 Zea mays Zm.2717.1.A1_at CK347342 - - 6e-6 At3g14350 SRF7 (STRUBBELIG-RECEPTOR FAMILY 7) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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