CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g66450

Gene name DC1 domain-containing protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.59 74.7 At1g66450 842963 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PO S.X. H.G.
0.74 86.1 At5g43040 834319 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMO S.X. H.G.
0.67 81.6 At3g07000 819885 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMO S.X. H.G.
0.61 76.7 At1g33610 840255 protein binding F:protein binding;P:signal transduction;C:endomembrane system;PMOBFAV S.X. H.G.
0.56 73.0 At3g46720 823825 UDP-glucoronosyl/UDP-glucosyl transferase family protein F:transferase activity, transferring hexosyl groups, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF S.X. H.G.
0.55 70.6 At4g11550 826759 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMO S.X. H.G.
0.50 65.3 At1g55390 841986 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;BOMPFVA S.X. H.G.
0.50 65.3 At2g27010 817243 CYP705A9 member of CYP705A S.X. H.G.
0.48 62.5 At1g55700 842019 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:intracellular;PMO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
216.3 100.0 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
191.3 100.0 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
90.4 99.9 GSM184481 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
82.1 99.9 GSM133762 Lindsey_1-14_torpedo-root_Rep1_ATH1 GSE5730 Transcriptional profiling of laser-capture micro-dissected embryonic tissues
82.1 99.9 GSM143301 Ts_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
81.1 99.9 GSM143300 Ts_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
73.2 99.9 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
72.8 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
72.2 99.9 GSM143302 Ts_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
68.1 99.9 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.47 5e-160 565 At1g66440 842962 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PFO C.G. S.X.
0.34 1e-71 272 At1g44030 841003 DC1 domain-containing protein F:unknown;P:unknown;C:chloroplast;PMFOB C.G. S.X.
0.38 6e-64 246 At5g48320 834885 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMFV C.G. S.X.
0.34 4e-62 240 At4g26380 828744 DC1 domain-containing protein F:protein binding, zinc ion binding;P:intracellular signaling cascade;C:cellular_component unknown;PMOF C.G. S.X.
0.33 4e-62 240 At1g44020 841002 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFOM C.G. S.X.
0.30 6e-61 236 At5g03360 831864 DC1 domain-containing protein F:unknown;P:unknown;C:cellular_component unknown;PBOVMA C.G. S.X.
0.34 5e-58 226 At4g15070 827170 DC1 domain-containing protein F:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMO C.G. S.X.
0.36 2e-54 214 At4g02540 827919 DC1 domain-containing protein F:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POMF C.G. S.X.
0.37 3e-53 210 At1g62030 842498 DC1 domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMO C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 2e+0 36 Glycine max GmaAffx.83013.1.S1_at BQ080142 - - 8e-1 At5g16023 RTFL18 (ROTUNDIFOLIA LIKE 18) C.G. S.X.
0.02 1e-1 38 Hordeum vulgare Contig21945_at Contig21945 - - 4e+0 At2g23960 defense-related protein, putative C.G. S.X.
0.02 2e-3 46 Oryza sativa OsAffx.7656.2.S1_x_at - - - 0 C.G. S.X.
0.01 2e+0 36 Populus trichocarpa PtpAffx.67394.1.S1_at DN501126 hypothetical protein - 1e+0 At3g48710 - C.G. S.X.
0.02 2e-2 42 Triticum aestivum TaAffx.12357.1.S1_at BJ269842 - - 2e-2 At1g49400 emb1129 (embryo defective 1129) C.G. S.X.
0.02 1e+0 34 Vitis vinifera 1617805_at CD013683 hypothetical protein LOC100254609 - 1e-13 At1g12470 Pep3/Vps18/deep orange family protein C.G. S.X.
0.02 2e-3 44 Zea mays Zm.16232.3.S1_at BU571738 - - 1e+0 At3g46430 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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