CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g66270

Gene name BGLU21

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At1g66270 842944 BGLU21 F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:cellular response to phosphate starvation, response to salt stress;C:vacuole, membrane;BOPMFA S.X. H.G.
0.70 83.5 At1g54000 841838 myrosinase-associated protein, putative F:lipase activity, hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:vacuolar membrane, plasma membrane, vacuole, plant-type cell wall, plant-type vacuole;PBOFM S.X. H.G.
0.67 81.6 At3g16420 820890 PBP1 (PYK10-BINDING PROTEIN 1) The PBP1(PYK10-binding protein 1) assists the PYK10 (beta-glucosidase complex) in its activity and may act like a molecular chaperone that facilitates the correct polymerization of PYK10, when tissues are damaged and subcellular structures are destroyed by pests. S.X. H.G.
0.61 76.7 At3g15950 820839 NAI2 Similar to TSK-associating protein 1 (TSA1), contains 10 EFE repeats, a novel repeat sequence unique to plants. Expressed preferentially in the roots.Protein is localized to ER bodies- an endoplasmic reticulum derived structure. Loss of function mutations lack ER bodies. S.X. H.G.
0.60 75.7 At3g09260 820082 PYK10 Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica. S.X. H.G.
0.58 73.8 At3g16460 820894 jacalin lectin family protein F:copper ion binding;P:response to cold;C:cytosol, nucleus, membrane;BOMPFVA S.X. H.G.
0.56 73.0 At5g26280 832697 meprin and TRAF homology domain-containing protein / MATH domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:membrane;PFOM S.X. H.G.
0.52 67.4 At4g27860 828899 integral membrane family protein F:molecular_function unknown;P:biological_process unknown;C:integral to membrane;POMBF S.X. H.G.
0.48 62.5 At2g22770 816807 NAI1 regulates the development of ER bodies. also involves in response to the endophytic fungus Piriformospora indica. S.X. H.G.
0.40 50.8 At5g23830 832448 MD-2-related lipid recognition domain-containing protein / ML domain-containing protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
44.2 99.8 GSM184534 Protoplasted root cells 2hr continuous KNO3 treated, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
41.9 99.8 GSM184544 Whole roots 2hr KNO3 treated then frozen, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
41.7 99.8 GSM184532 Protoplasted root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
33.1 99.7 GSM133969 Birnbaum_1-20_LRC-2_Rep2_ATH1 GSE5749 A gene expression map of the Arabidopsis root
27.6 99.7 GSM133989 Birnbaum_1-22_gl2-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root
27.4 99.7 GSM133968 Birnbaum_1-19_LRC-1_Rep1_ATH1 GSE5749 A gene expression map of the Arabidopsis root
25.7 99.7 E-ATMX-31-raw-cel-1516948001
23.8 99.6 GSM291128 root - 08% oxygen - 48h - B GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
23.7 99.6 GSM133970 Birnbaum_1-21_LRC-3_Rep3_ATH1 GSE5749 A gene expression map of the Arabidopsis root
21.1 99.6 GSM252691 Section of Root from 270 mm to 340 mm harvested immediately rep2 GSE9996 Organ regeneration in plants is independent of stem cell niche activity
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.93 0 2282 At1g66280 842945 BGLU22 F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:membrane;BOPMFA C.G. S.X.
0.77 9e-155 547 At3g09260 820082 PYK10 Encodes beta-glucosidase.The major constituent of ER bodies. One of the most abundant proteins in Arabidopsis seedlings. Exist in an soluble (inactive) and non-soluble (active) form, most probably formed in a polymerization process. Involved in the mutualistic interaction between Arabidopsis and the endophytic fungus Piriformospora indica. C.G. S.X.
0.67 8e-75 282 At5g28510 832944 BGLU24 (BETA GLUCOSIDASE 24) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
0.08 6e-14 79 At5g48175 834870 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.22 6e-14 79 At1g75940 843927 ATA27 encodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen. C.G. S.X.
0.21 2e-13 77 At3g21370 821691 BGLU19 (BETA GLUCOSIDASE 19) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
0.23 1e-11 71 At1g52400 841670 BGLU18 (BETA GLUCOSIDASE 18) encodes a member of glycosyl hydrolase family 1, located in inducible ER bodies which were formed after wounding, required in inducible ER body formation C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e-3 46 Glycine max Gma.2241.1.A1_at AW350857 - - 4e-6 At1g51490 BGLU36 (BETA GLUCOSIDASE 36) C.G. S.X.
0.02 2e-2 40 Hordeum vulgare Contig2350_at Contig2350 - - 8e-1 At1g26560 BGLU40 (BETA GLUCOSIDASE 40) C.G. S.X.
0.03 2e-3 46 Oryza sativa Os08g0509400 AK059210.1 - Glycoside hydrolase, family 1 protein 4e-3 At3g09260 PYK10 C.G. S.X.
0.10 2e-5 52 Populus trichocarpa PtpAffx.216821.1.S1_s_at pmrna31856 hypothetical protein - 3e-8 At1g66280 BGLU22 C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.119729.1.S1_at BJ260442 - - 7e-5 At1g26560 BGLU40 (BETA GLUCOSIDASE 40) C.G. S.X.
0.02 9e-1 34 Vitis vinifera 1608809_at CF513555 hypothetical protein LOC100267558 - 1e-1 At2g22320 unknown protein C.G. S.X.
0.01 5e+0 32 Zea mays Zm.2893.1.A1_at BG842397 hypothetical protein LOC100191652 - 1e+0 At1g77660 MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein /phosphatidylinositol-4-phosphate 5-kinase-related C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009651 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
S GO:0016036 A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of phosphate.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00412 Glycoside Hydrolase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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