Gene omics information

Query gene ID At1g66250
Gene name glycosyl hydrolase family 17 protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7586.9At1g66250842942glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFOS.X.H.G.
0.5570.6At2g34190817980xanthine/uracil permease family proteinF:transmembrane transporter activity;P:transport;C:membrane;BOMPFAVS.X.H.G.
0.5166.3At4g15830827264bindingF:binding;P:biological_process unknown;C:cellular_component unknown;MPOFS.X.H.G.
0.4963.5At3g12870820470unknown proteinF:unknown;P:unknown;C:cellular_component unknown;PS.X.H.G.
0.4862.5At3g53190824485pectate lyase family proteinF:lyase activity, pectate lyase activity;P:biological_process unknown;C:anchored to membrane;BPFOS.X.H.G.
0.4761.2At1g02730839467ATCSLD5Encodes a gene similar to cellulose synthase. Knock-out mutant has reduced growth, reduced xylan level and reduced xylan synthase activity in stems.S.X.H.G.
0.4659.8At2g26760817217CYCB1F:cyclin-dependent protein kinase regulator activity;P:regulation of cell cycle;C:nucleus;MPOFVS.X.H.G.
0.4558.3At3g14190820636unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4457.2At3g02640821289unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;POS.X.H.G.
0.4457.2At3g25980822195mitotic spindle checkpoint protein, putative (MAD2)F:DNA binding;P:mitosis, mitotic cell cycle spindle assembly checkpoint;C:endomembrane system;MFOPS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
311.3100.0GSM133755Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
155.899.9GSM133756Lindsey_1-10_heart-stage-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
42.699.8GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
42.299.8E-MEXP-1451-raw-cel-1585200330
39.299.8E-MEXP-1451-raw-cel-1585200298
31.999.7E-MEXP-1451-raw-cel-1585200362
23.599.6E-MEXP-728-raw-cel-1062074409
22.599.6E-TABM-19-raw-cel-489757107
22.499.6E-MEXP-728-raw-cel-1062074303
22.399.6GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.122e-757At2g01630814692glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane;PFOC.G.S.X.
0.022e-448At5g56590835760glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, plasma membrane, anchored to membrane, plant-type cell wall;PFOBC.G.S.X.
0.022e-448At4g29360829057glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to plasma membrane, anchored to membrane;PFOBC.G.S.X.
0.018e-136At1g79630844302protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:N-terminal protein myristoylation;C:cellular_component unknown;PMOFVBC.G.S.X.
0.018e-136At1g16220838190protein phosphatase 2C family protein / PP2C family proteinF:protein serine/threonine phosphatase activity, catalytic activity;P:N-terminal protein myristoylation;C:plasma membrane;PMOFBVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-656Glycine maxGmaAffx.91055.1.S1_atCF806780--4e-7At1g66250glycosyl hydrolase family 17 proteinC.G.S.X.
0.016e+032Hordeum vulgareContig16135_atContig16135--2e+1At5g14730unknown proteinC.G.S.X.
0.021e-140Oryza sativaOs03g0221500AK103138.1-Glycoside hydrolase, family 17 protein1e-3At2g01630glycosyl hydrolase family 17 protein / beta-1,3-glucanase, putativeC.G.S.X.
0.304e-25117Populus trichocarpaPtpAffx.202562.1.S1_s_atpmrna5134hypothetical protein-2e-25At1g66250glycosyl hydrolase family 17 proteinC.G.S.X.
0.022e-138Triticum aestivumTaAffx.105544.1.S1_atCA732967--5e-12At1g33980Smg-4/UPF3 family proteinC.G.S.X.
0.029e-134Vitis vinifera1614514_atCF405361hypothetical protein LOC100256478-5e+0At3g25855unknown proteinC.G.S.X.
0.023e-136Zea maysZmAffx.355.1.A1_atAI670542--3e+0At1g77890unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0005975The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name
00412Link to KaPPA-View 4Glycoside Hydrolase
00436Link to KaPPA-View 4Callose/glucan degradation



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage