Gene omics information

Query gene ID At1g66160
Gene name U-box domain-containing protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.2115.8At1g66160842931U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVS.X.H.G.
0.7586.9At1g02400839508GA2OX6 (GIBBERELLIN 2-OXIDASE 6)Encodes a gibberellin 2-oxidase.S.X.H.G.
0.2522.6At3g52450824410PUB22 (PLANT U-BOX 22)Encodes a cytoplasmically localized U-box domain E3 ubiquitin ligase protein that is involved in the response to water stress and acts as a negative regulator of PAMP-triggered immunity.S.X.H.G.
0.2115.8At2g22880816819VQ motif-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PS.X.H.G.
0.135.8At1g76070843939unknown proteinF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;PFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
121.999.9E-MEXP-1443-raw-cel-1581869863
96.599.9E-MEXP-1443-raw-cel-1581869921
85.299.9E-MEXP-1443-raw-cel-1581869632
69.699.9GSM13784Cycloheximide - replicateGSE911Identification of LEAFY targets during reproductive transition
66.799.8GSM131134AtGen_B-20_2-6-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
63.399.8GSM131148AtGen_B-34_3-6-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
62.699.8GSM13780CycloheximideGSE911Identification of LEAFY targets during reproductive transition
62.499.8GSM13779Dexamethasone plus cycloheximideGSE911Identification of LEAFY targets during reproductive transition
58.099.8GSM131147AtGen_B-33_3-5-1_REP3_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
55.199.8GSM131132AtGen_B-18_2-4-1_REP2_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.222e-1067At5g37490833727U-box domain-containing proteinF:ubiquitin-protein ligase activity, binding;P:response to chitin;C:ubiquitin ligase complex;PMOFBVC.G.S.X.
0.012e-138At4g15380827204CYP705A4member of CYP705AC.G.S.X.
0.016e-136At5g49970835061ATPPOX (A. THALIANA PYRIDOXIN (PYRODOXAMINE) 5'-PHOSPHATE OXIDASE)encodes the bifunctional pyridoxine (pyridoxamine) 5-phosphate oxidase (PPOX)(EC 1.4.3.5) that is involved in the formation of pyridoxal 5'-phosphate (member of the vitamin B6 group)C.G.S.X.
0.026e-136At5g51580835232unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPC.G.S.X.
0.026e-136At4g21920828281unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PC.G.S.X.
0.026e-136At3g51450824308strictosidine synthase family proteinF:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAFC.G.S.X.
0.016e-136At1g18740838456unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-242Glycine maxGmaAffx.23402.1.S1_atBI975130--1e-5At3g52450PUB22 (PLANT U-BOX 22)C.G.S.X.
0.025e+032Hordeum vulgareHVSMEn0019D12r2_s_atHVSMEn0019D12r2--4e+0At5g66815unknown proteinC.G.S.X.
0.023e-138Oryza sativaOsAffx.6246.1.S1_at---0C.G.S.X.
0.029e-136Populus trichocarpaPtpAffx.69764.2.A1_atCV265274hypothetical protein-6e-6At5g15400U-box domain-containing proteinC.G.S.X.
0.023e+034Triticum aestivumTa.11674.1.S1_atCA692708--3e-1At1g53080legume lectin family proteinC.G.S.X.
0.028e-134Vitis vinifera1622756_atCF414976similar to 60S ribosomal protein L34-5e-31At1g69620RPL34 (RIBOSOMAL PROTEIN L34)C.G.S.X.
0.024e+032Zea maysZm.4745.1.A1_atAI739741hypothetical protein LOC100194119-1e-3At3g55350unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0010200A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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