CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g65510

Gene name unknown protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.48 62.5 At1g65510 842863 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:endomembrane system;P S.X. H.G.
0.49 63.5 At2g37750 818352 unknown protein F:molecular_function unknown;P:biological_process unknown;C:unknown;P S.X. H.G.
0.44 57.2 At4g37010 829855 caltractin, putative / centrin, putative F:calcium ion binding;P:biological_process unknown;C:unknown;MFPOB S.X. H.G.
0.39 48.4 At2g01530 814682 MLP329 (MLP-LIKE PROTEIN 329) F:copper ion binding;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.39 48.4 At1g09740 837502 ethylene-responsive protein, putative F:molecular_function unknown;P:response to stress;C:cellular_component unknown;BPAOFM S.X. H.G.
0.35 41.6 At5g44920 834522 Toll-Interleukin-Resistance (TIR) domain-containing protein F:transmembrane receptor activity;P:signal transduction, defense response, innate immune response;C:endoplasmic reticulum;PBO S.X. H.G.
0.34 39.8 At1g23120 838920 major latex protein-related / MLP-related F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.34 39.8 At2g44010 819006 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.33 38.1 At1g67030 843022 ZFP6 (ZINC FINGER PROTEIN 6) Encodes a zinc finger protein containing only a single zinc finger. S.X. H.G.
0.33 38.1 At2g29995 817550 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
129.7 99.9 E-MEXP-807-raw-cel-1173273170
123.6 99.9 E-MEXP-807-raw-cel-1173273060
94.4 99.9 E-MEXP-807-raw-cel-1173273116
65.8 99.8 GSM291124 root - 21% oxygen - 48h - F GSE11558 transcript profiling of the adaptive response to decreases in oxygen concentration in the roots of Arabidopsis plants
64.8 99.8 E-MEXP-828-raw-cel-1156922485
63.9 99.8 GSM131325 AtGen_6-3521_Saltstress-Roots-12.0h_Rep1 GSE5623 AtGenExpress: Stress Treatments (Salt stress)
55.8 99.8 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
50.8 99.8 E-MEXP-828-raw-cel-1156922595
45.2 99.8 GSM231204 chl1 at T0.5, biological rep3 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
44.8 99.8 GSM231198 wild-type at T0.5, biological rep3 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.23 5e-7 54 At1g65490 842861 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.19 1e-4 46 At1g65500 842862 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.10 7e-3 40 At1g65486 6240283 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.02 1e-1 36 At1g27960 839689 ECT9 (evolutionarily conserved C-terminal region 9) encodes a protein whose C-terminal region is similar to ECT1 and ECT2, which bind to CIPK1. C.G. S.X.
0.06 4e-1 34 At4g18501 3770110 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.03 4e-1 34 At2g24250 816959 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 4e-1 34 At1g48930 841315 AtGH9C1 (Arabidopsis thaliana glycosyl hydrolase 9C1) F:hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;PBMOF C.G. S.X.
0.09 4e-1 34 At1g75750 843908 GASA1 (GAST1 PROTEIN HOMOLOG 1) GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e+0 32 Glycine max PsAffx.CL2301Contig1_at PsAffx.CL2301Contig1 - - 8e-1 At2g21820 unknown protein C.G. S.X.
0.04 9e-1 32 Hordeum vulgare Contig5416_s_at Contig5416 - - 9e-1 At1g51140 basic helix-loop-helix (bHLH) family protein C.G. S.X.
0.03 1e+1 30 Oryza sativa Os08g0526300 AK070382.1 - Conserved hypothetical protein 3e-12 At4g11960 PGRL1B (PGR5-Like B) C.G. S.X.
0.05 6e-1 34 Populus trichocarpa PtpAffx.16372.1.S1_at BU872049 - - 7e-1 At1g65510 unknown protein C.G. S.X.
0.05 2e+0 32 Triticum aestivum TaAffx.107848.2.S1_at CA680182 - - 4e+0 At5g05250 unknown protein C.G. S.X.
0.04 5e-1 32 Vitis vinifera 1619873_at CF404612 hypothetical protein LOC100264420 - 2e-9 At5g42250 alcohol dehydrogenase, putative C.G. S.X.
0.05 3e+0 30 Zea mays ZmAffx.1092.1.S1_s_at AW066155 - - 1e-107 Atcg00490 - C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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