Gene omics information

Query gene ID At1g64890
Gene name integral membrane transporter family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4050.8At1g64890842797integral membrane transporter family proteinF:transporter activity;P:transport;C:membrane;BOPMAFS.X.H.G.
0.7586.9At1g11210837662unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:endomembrane system;POS.X.H.G.
0.5773.8At1g49720841395ABF1 (ABSCISIC ACID RESPONSIVE ELEMENT-BINDING FACTOR 1)Identified as a protein that binds to abscisic acid response elements. May mediate transcriptional regulation of ABA responses.S.X.H.G.
0.3541.6At5g24470832518APRR5 (ARABIDOPSIS PSEUDO-RESPONSE REGULATOR 5)Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light.S.X.H.G.
0.3338.1At5g52310835307LTI78 (LOW-TEMPERATURE-INDUCED 78)cold regulated gene, the 5' region of cor78 has cis-acting regulatory elements that can impart cold-regulated gene expressionS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
87.099.9GSM269823T6 leaf-drought-rep2GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
75.799.9GSM131275AtGen_6-1511_Cold(4°C)-Shoots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
71.799.9GSM131282AtGen_6-1622_Cold(4°C)-Roots-24.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
70.299.9GSM131281AtGen_6-1621_Cold(4°C)-Roots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
69.899.9GSM131276AtGen_6-1512_Cold(4°C)-Shoots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
65.199.8GSM131278AtGen_6-1522_Cold(4°C)-Roots-12.0h_Rep2GSE5621AtGenExpress: Stress Treatments (Cold stress)
63.399.8GSM74900Wildtype_24H Cold_Rep1GSE3326ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
58.599.8GSM131279AtGen_6-1611_Cold(4°C)-Shoots-24.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
57.499.8GSM131277AtGen_6-1521_Cold(4°C)-Roots-12.0h_Rep1GSE5621AtGenExpress: Stress Treatments (Cold stress)
55.099.8GSM269815T6 leaf-drought-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.017e-136At5g07760830669formin homology 2 domain-containing protein / FH2 domain-containing proteinF:actin binding;P:cellular component organization, actin cytoskeleton organization;C:chloroplast;MPBOFVAC.G.S.X.
0.017e-136At4g27940828907mitochondrial substrate carrier family proteinF:binding;P:transport, mitochondrial transport;C:mitochondrial inner membrane, membrane;MFPOC.G.S.X.
0.027e-136At4g22950828394AGL19 (AGAMOUS-LIKE 19)MADS-box protein AGL19C.G.S.X.
0.027e-136At4g11950826802unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.017e-136At4g05540825906tRNA-splicing endonuclease positive effector-relatedF:unknown;P:biological_process unknown;C:cellular_component unknown;MFBOPAVC.G.S.X.
0.027e-136At3g058586240354unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.017e-136At3g03440821253armadillo/beta-catenin repeat family proteinF:binding;P:biological_process unknown;C:chloroplast;PMFOBC.G.S.X.
0.013e+034At5g23170832381protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.059e-136Glycine maxGmaAffx.24263.1.S1_atBU081016--3e-1At1g64890integral membrane transporter family proteinC.G.S.X.
0.023e-136Hordeum vulgarerbaal1l19_s_atrbaal1l19--9e+0At5g47670NF-YB6 (NUCLEAR FACTOR Y, SUBUNIT B6)C.G.S.X.
0.015e+034Oryza sativaOs12g0563600AK069514.1-Protein of unknown function DUF538 family protein3e-2At1g28190unknown proteinC.G.S.X.
0.024e+034Populus trichocarpaPtpAffx.212359.1.S1_atpmrna24226hypothetical protein-5e-19At1g72090radical SAM domain-containing protein / TRAM domain-containing proteinC.G.S.X.
0.032e-138Triticum aestivumTa.1699.1.S1_x_atBE445850--3e+0At1g34440unknown proteinC.G.S.X.
0.132e-756Vitis vinifera1621840_atCB036000--4e-7At1g64890integral membrane transporter family proteinC.G.S.X.
0.021e+034Zea maysZmAffx.793.1.A1_atAI770322--8e-1At1g64890integral membrane transporter family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage