Gene omics information

Query gene ID At1g64850
Gene name calcium-binding EF hand family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g64850842793calcium-binding EF hand family proteinF:calcium ion binding;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.4457.2At2g35810818154unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BPOS.X.H.G.
0.1710.2At4g10100826601CNX7molybdenum cofactor synthesis family protein, similar to Molybdenum cofactor synthesis protein 2 small subunit (Molybdopterin- synthase small subunit) (MOCS2A) (MOCO1-A) (Swiss-Prot:O96033) (Homo sapiens); contains TIGRFAM TIGR01682: molybdopterin converting factor, subunit 1; sir loss-of-function mutants are resistant to sirtinol, a modulator of auxin signaling.S.X.H.G.
0.030.6At4g26710828778ATP synthase subunit H family proteinF:hydrogen ion transmembrane transporter activity;P:ATP hydrolysis coupled proton transport;C:vacuole;MPOFS.X.H.G.
0.020.4At5g64400836561-F:molecular_function unknown;P:biological_process unknown;C:unknown;MFPOBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
25.299.6GSM269812WT leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
18.599.5GSM133780Lindsey_1-3_globular-apical_Rep3_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
10.499.2GSM134301Penfield_1-3_endosperm-control_Rep3_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
9.799.1GSM269814T6 leaf-well watered-rep1GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
9.299.1GSM134299Penfield_1-1_endosperm-control_Rep1_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
9.299.1E-MEXP-1443-raw-cel-1581869688
8.299.0GSM134300Penfield_1-2_endosperm-control_Rep2_ATH1GSE5751The early post-germinative embryo and endosperm transcriptomes in Arabidopsis
7.598.8GSM252680Regenerating Stump of Root Tip Cut at 130 mm first and then Recut after 22 hrs Taking 70 mm of Stump (4dpg) rep2GSE9996Organ regeneration in plants is independent of stem cell niche activity
7.598.8GSM133755Lindsey_1-7_heart-stage-cotyledon_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
7.598.8GSM269829WT leaf-drought-rep3GSE10670Global expression profiling of wild type and transgenic Arabidopsis plants in response to water stress
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.042e-136At3g28940822530avirulence-responsive protein, putative / avirulence induced gene (AIG) protein, putativeF:molecular_function unknown;P:response to bacterium;C:plasma membrane, chloroplast;PFOBAC.G.S.X.
0.042e-136At3g28930822529AIG2 (AVRRPT2-INDUCED GENE 2)avrRpt2-induced gene that exhibits RPS2- and avrRpt2-dependent induction early after infection with Pseudomonas syringae pv maculicola strain ES4326 carrying avrRpt2C.G.S.X.
0.014e+032At5g50380835106ATEXO70F1 (exocyst subunit EXO70 family protein F1)A member of EXO70 gene family, putative exocyst subunits, conserved in land plants. Arabidopsis thaliana contains 23 putative EXO70 genes, which can be classified into eight clusters on the phylogenetic tree.C.G.S.X.
0.024e+032At5g34780833376dehydrogenase E1 component family proteinPutative ketopantoate reductase (KPR). This enzyme is speculated to be the missing enzyme in the biosynthesis of pantothenate.C.G.S.X.
0.024e+032At5g28920833015unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknownC.G.S.X.
0.014e+032At5g01630831710BRCA2B (BRCA2-LIKE B)Ortholog of breast cancer susceptibility protein 2. Essential at meiosis. Interacts with with both Rad51 and Dss1(I) or both Dmc1 and Dss1(I) in a tripartite complex.C.G.S.X.
0.004e+032At5g53460835427GLT1NADH-dependent glutamate synthaseC.G.S.X.
0.024e+032At5g39590833955-F:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;MOPFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.035e+032Glycine maxPsAffx.CL1272Contig1_atPsAffx.CL1272Contig1--3e-1At5g08290YLS8C.G.S.X.
0.037e+030Hordeum vulgareHW06D22u_atHW06D22u--6e-5At1g61250SC3 (SECRETORY CARRIER 3)C.G.S.X.
0.045e-136Oryza sativaOs.50660.1.S1_at---0C.G.S.X.
0.043e-136Populus trichocarpaPtpAffx.151091.1.S1_s_atBI132008hypothetical protein-8e-11At3g18800unknown proteinC.G.S.X.
0.044e+032Triticum aestivumTaAffx.85134.1.S1_atCA625310--4e+0At1g64850calcium-binding EF hand family proteinC.G.S.X.
0.041e-652Vitis vinifera1607822_atCB345091--7e-6At1g64850calcium-binding EF hand family proteinC.G.S.X.
0.036e+030Zea maysZmAffx.745.1.A1_atAI745776--3e+0At5g17650glycine/proline-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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