Gene omics information

Query gene ID At1g64280
Gene name NPR1 (NONEXPRESSER OF PR GENES 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3338.1At1g64280842733NPR1 (NONEXPRESSER OF PR GENES 1)This gene is a key regulator of the salicylic acid (SA)-mediated systemic acquired resistance (SAR) pathway. It is similar to the transcription factor inhibitor I kappa B, and contains ankyrin repeats. It confers resistance to the pathogens Pseudomonas syringae and Peronospora parasitica in a dosage-dependent fashion. Although transgenic Arabidopsis plants overexpressing NPR1 acquire enhanced sensitivity to SA and (benzothiadiazole) BTH, they display no obvious detrimental morphological changes and do not have elevated pathogenesis-related gene expression until activated by inducers or pathogens.S.X.H.G.
0.7586.9At5g04930830375ALA1 (aminophospholipid ATPase1)Encodes a putative aminophospholipid translocase (p-type ATPase) involved in chilling response.S.X.H.G.
0.6781.6At5g61210836242SNAP33 (SOLUBLE N-ETHYLMALEIMIDE-SENSITIVE FACTOR ADAPTOR PROTEIN 33)membrane localized t-SNARE SNAP25 homologue, probably involved in cytokinesis and cell plate formationS.X.H.G.
0.6075.7At3g12740820456ALIS1 (ALA-INTERACTING SUBUNIT 1)Physically interacts with ALA3, and is required for the phospholipid translocase activity of ALA3.S.X.H.G.
0.6075.7At5g48380834892leucine-rich repeat family protein / protein kinase family proteinF:protein binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVAS.X.H.G.
0.5773.8At1g22280838835protein phosphatase 2C, putative / PP2C, putativeF:protein serine/threonine phosphatase activity, catalytic activity;P:biological_process unknown;C:nucleus, plasma membrane;PMOBFVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
31.599.7GSM128662Underwood_1-15_Cor-5x10e7-10h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
31.399.7GSM128661Underwood_1-14_Cor-5x10e7-10h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
18.699.5E-NASC-76-raw-cel-1359878951
18.399.5E-NASC-76-raw-cel-1359879106
16.799.5GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
16.699.5GSM128676Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
13.099.4GSM134385St.Clair_1-46_293_Est_0.30mM-SA-in-0.02%-silwet_Rep1_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
12.699.3E-NASC-76-raw-cel-1359879132
12.399.3GSM134386St.Clair_1-47_334_Est_0.30mM-SA-in-0.02%-silwet_Rep2_ATH1GSE5754Expression Level Polymorphism Project (ELP) - Est
11.899.3GSM128677Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.422e-48194At4g26120828718ankyrin repeat family protein / BTB/POZ domain-containing proteinF:protein binding;P:response to chitin;C:cellular_component unknown;OMPBFVC.G.S.X.
0.012e-138At3g13940820607DNA binding / DNA-directed RNA polymeraseF:DNA-directed RNA polymerase activity, DNA binding;P:transcription;C:nucleus;FMPOBC.G.S.X.
0.019e-136At5g45110834545NPR3 (NPR1-LIKE PROTEIN 3)Encodes a paralog of NPR1. Involved in negative regulation of defense responses against bacterial and oomycete pathogens. npr3 mutants has elevated level of PR1 expression. Interacts with TGA2, TGA3, TGA5 and TGA6 in yeast two hybrid assays.C.G.S.X.
0.019e-136At5g52560835333ATUSP (ARABIDOPSIS THALIANA UDP-SUGAR PYROPHOSPHORYLASE)Encodes a protein with UTP:sugar 1-phosphate uridylyltransferase activity, which has been shown to use a wide range of substrates including glucose-1-P, galactose-1-P, xylose-1-P, arabinose-1-P and glucuronate-1-P. The enzyme was shown to require Mg2+ or Mn2+ for activity.C.G.S.X.
0.019e-136At4g15430827214-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMOC.G.S.X.
0.014e+034At3g13190820509myosin heavy chain-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.025e+034Glycine maxGmaAffx.25274.1.S1_atBE608510--4e-1At3g49610DNA bindingC.G.S.X.
0.012e+034Hordeum vulgareContig24993_atContig24993--8e-2At4g33730pathogenesis-related protein, putativeC.G.S.X.
0.022e-346Oryza sativaOs01g0194300AY323485.1-NPR1-like protein1e-3At1g64280NPR1 (NONEXPRESSER OF PR GENES 1)C.G.S.X.
0.051e+036Populus trichocarpaPtp.6596.1.S1_atBI124176NPR1/NIM1-like regulatory protein-4e-1At1g64280NPR1 (NONEXPRESSER OF PR GENES 1)C.G.S.X.
0.032e-138Triticum aestivumTa.7993.1.A1_atBQ161094--1e+0At1g36756unknown proteinC.G.S.X.
0.021e+034Vitis vinifera1620051_atCF211598--3e+0Atmg00480-C.G.S.X.
0.012e+034Zea maysZm.9157.1.A1_atCB351321molybdenum cofactor synthesis protein 2 large subunit-7e+0At1g50760unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0009627The salicylic acid mediated response to a pathogen which confers broad spectrum resistance.
XGO:0050832Reactions triggered in response to the presence of a fungus that act to protect the cell or organism.
XGO:0031348Any process that stops, prevents or reduces the frequency, rate or extent of a defense response.
XGO:0008219The specific activation or halting of processes within a cell so that its vital functions markedly cease, rather than simply deteriorating gradually over time, which culminates in cell death.
XGO:0009408A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
XGO:0009611A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
XGO:0009617A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a bacterium.
XGO:0009625A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from an insect.
SGO:0009862The series of molecular signals mediated by salicylic acid involved in systemic acquired resistance.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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