Gene omics information

Query gene ID At1g63870
Gene name disease resistance protein (TIR-NBS-LRR class), putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g63870842691disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAVS.X.H.G.
0.6176.7At2g15500816042-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PFMS.X.H.G.
0.5974.7At3g22770821848F-box family protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5873.8At1g475203767382transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5773.8At1g20800838671F-box family proteinF-box family proteinS.X.H.G.
0.5673.0At1g19930838582kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMBOVAS.X.H.G.
0.5673.0At2g044903768047transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5570.6At1g28160839710ethylene-responsive element-binding family proteinencodes a member of the ERF (ethylene response factor) subfamily B-1 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 15 members in this subfamily including ATERF-3, ATERF-4, ATERF-7, and leafy petiole.S.X.H.G.
0.5570.6At3g58280824997-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBS.X.H.G.
0.5469.5At2g44030819008kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PMBOFAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
291.1100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
285.6100.0GSM143307Low_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
271.0100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
266.2100.0GSM143299High_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
264.9100.0GSM143298Low_Na_seg_pool_ts_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
247.4100.0GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
230.0100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
227.8100.0GSM133762Lindsey_1-14_torpedo-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
215.3100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
213.6100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.615e-170599At1g63880842692disease resistance protein (TIR-NBS-LRR class), putativeEncodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.C.G.S.X.
0.451e-102375At1g64070842711RLM1 (RESISTANCE TO LEPTOSPHAERIA MACULANS 1)Encodes a TIR-NBS-LRR class of disease resistance protein effective against Leptosphaeria maculans.C.G.S.X.
0.393e-79297At1g63750842679ATP binding / nucleoside-triphosphatase/ nucleotide binding / protein bindingF:protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:defense response, apoptosis;C:unknown;PMBOFVAC.G.S.X.
0.222e-67258At1g56540842107disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAVC.G.S.X.
0.263e-66254At1g56520842105disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFVAC.G.S.X.
0.408e-61236At5g58120835924disease resistance protein (TIR-NBS-LRR class), putativeF:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
0.431e-56222At2g16870816188disease resistance protein (TIR-NBS-LRR class), putativeF:protein binding, transmembrane receptor activity, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane;PMBOFAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.011e-140Glycine maxGmaAffx.81235.1.A1_atBE823811--3e+0At5g40595unknown proteinC.G.S.X.
0.018e-136Hordeum vulgareContig14222_atContig14222--6e-3At3g57880C2 domain-containing proteinC.G.S.X.
0.013e+036Oryza sativaOs12g04665009640.m02690--6e-1At2g47400CP12-1C.G.S.X.
0.014e-242Populus trichocarpaPtpAffx.224935.1.S1_atpmrna43869--1e-3At5g18360disease resistance protein (TIR-NBS-LRR class), putativeC.G.S.X.
0.013e-242Triticum aestivumTa.6115.1.A1_atBJ239135--2e-2At1g69980unknown proteinC.G.S.X.
0.023e-240Vitis vinifera1608197_atCF512469hypothetical protein LOC100263726-1e+0At3g55515RTFL7 (ROTUNDIFOLIA LIKE 7)C.G.S.X.
0.017e-136Zea maysZm.16828.2.S1_a_atCF632030amelogenin precursor like protein-5e+0Atcg01120-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006952Reactions, triggered in response to the presence of a foreign body or the occurrence of an injury, which result in restriction of damage to the organism attacked or prevention/recovery from the infection caused by the attack.
LGO:0006915A form of programmed cell death that begins when a cell receives internal or external signals that trigger the activity of proteolytic caspases, proceeds through a series of characteristic stages typically including rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), and plasma membrane blebbing (but maintenance of its integrity until the final stages of the process), and ends with the death of the cell.
LGO:0007165The cascade of processes by which a signal interacts with a receptor, causing a change in the level or activity of a second messenger or other downstream target, and ultimately effecting a change in the functioning of the cell.
LGO:0045087Innate immune responses are defense responses mediated by germline encoded components that directly recognize components of potential pathogens.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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