CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g62770

Gene name invertase/pectin methylesterase inhibitor family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.13 5.8 At1g62770 842576 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.15 7.8 At3g48970 824058 copper-binding family protein F:copper ion binding, metal ion binding;P:copper ion transport, metal ion transport;C:unknown;PBO S.X. H.G.
0.13 5.8 At4g16515 827350 unknown protein F:molecular_function unknown;P:unknown;C:endomembrane system;P S.X. H.G.
0.12 4.9 At4g27260 828834 WES1 encodes an IAA-amido synthase that conjugates Asp and other amino acids to auxin in vitro. Lines carrying insertions in this gene are hypersensitive to auxin. S.X. H.G.
0.11 4.1 At4g14130 827051 XTR7 (XYLOGLUCAN ENDOTRANSGLYCOSYLASE 7) xyloglucan endotransglycosylase-related protein (XTR7) S.X. H.G.
Click here to hide the above table.

Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
157.0 99.9 E-MEXP-1474-raw-cel-1593932705
139.3 99.9 E-MEXP-1474-raw-cel-1593932609
131.2 99.9 GSM75510 Col-0 6h NAA replicate 1 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
127.7 99.9 E-MEXP-1474-raw-cel-1593932513
114.8 99.9 GSM75514 Col-0 6h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
87.4 99.9 E-MEXP-1474-raw-cel-1593932673
72.0 99.9 E-MEXP-1474-raw-cel-1593932737
67.9 99.9 GSM282693 arf2_brz_1 GSE11216 Brassinazole treatment of arf2 and wild-type dark-grown seedlings
61.5 99.8 GSM75509 Col-0 2h NAA replicate 1 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
58.7 99.8 E-MEXP-1474-raw-cel-1593932481
Click here to hide the above table.

Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.08 3e-4 46 At4g12390 826848 PME1 (PECTIN METHYLESTERASE INHIBITOR 1) F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.03 1e+0 34 At5g20740 832197 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.03 1e+0 34 At2g47670 819380 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.01 1e+0 34 At1g18550 838436 ATP binding / microtubule motor F:microtubule motor activity, ATP binding;P:microtubule-based movement;C:microtubule associated complex;MOFPB C.G. S.X.
0.05 1e+0 34 At1g23205 838929 invertase/pectin methylesterase inhibitor family protein F:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.01 5e+0 32 At5g03800 831717 EMB175 (EMBRYO DEFECTIVE 175) Encodes a protein with a large central domain of 14 internal pentatricopeptide motifs (some degenerate) arranged in tandem. Mutations in this locus result in embryo lethality. C.G. S.X.
0.03 5e+0 32 At5g52970 835375 thylakoid lumen 15.0 kDa protein F:molecular_function unknown;P:biological_process unknown;C:thylakoid, thylakoid lumen, chloroplast thylakoid lumen, chloroplast;OBP C.G. S.X.
0.01 5e+0 32 At5g07360 830627 amidase family protein F:amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor;P:acrylonitrile catabolic process, aldoxime metabolic process;C:unknown;BOFMPA C.G. S.X.
Click here to hide the above table.

Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.08 2e-6 54 Glycine max Gma.12828.1.A1_at CD391702 - - 8e-7 At1g62770 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.04 2e+0 32 Hordeum vulgare rbaal31f01_s_at rbaal31f01 - - 5e-1 At1g76590 zinc-binding family protein C.G. S.X.
0.03 9e+0 32 Oryza sativa OsAffx.27627.1.S1_at - - - 0 C.G. S.X.
0.06 4e-1 36 Populus trichocarpa Ptp.857.1.S1_at CK089982 hypothetical protein - 4e-1 At1g62770 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.04 2e-2 40 Triticum aestivum TaAffx.28591.1.S1_at CA658540 - - 2e-2 At1g62770 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.05 9e-5 46 Vitis vinifera 1612763_at CF373209 hypothetical protein LOC100253894 - 3e-4 At1g62770 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
0.03 2e+0 32 Zea mays Zm.1934.1.S1_s_at AW519956 hypothetical protein LOC100216744 /// glycerophosphodiester phosphodiesterase - 3e+0 At1g62770 invertase/pectin methylesterase inhibitor family protein C.G. S.X.
Click here to hide the above table.

Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
N GO:0008150 Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.

Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
Click here to hide the above table.

Back to the CoP portal site

Back to the KAGIANA project homepage