Gene omics information

Query gene ID At1g62510
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At1g62510842548protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;OBPMVFAS.X.H.G.
0.3338.1At4g17245827437zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFVS.X.H.G.
0.3338.1At5g53970835480aminotransferase, putativeencodes tyrosine aminotransferase which is strongly induced upon aging and coronatine treatmentS.X.H.G.
0.2319.3At5g56100835709glycine-rich protein / oleosinF:molecular_function unknown;P:lipid storage;C:monolayer-surrounded lipid storage body, integral to membrane, membrane;PBS.X.H.G.
0.2217.5At1g54740841915-F:molecular_function unknown;P:biological_process unknown;C:unknown;OPMBFS.X.H.G.
0.103.4At1g06570837168PDS1 (PHYTOENE DESATURATION 1)Mutation of the PDS1 locus disrupts the activity of p-hydroxyphenylpyruvate dioxygenase (HPPDase), the first committed step in the synthesis of both plastoquinone and tocopherols in plants.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
53.199.8E-MEXP-475-raw-cel-680982485
49.599.8GSM131304AtGen_6-2612_Osmoticstress-Shoots-24.0h_Rep2GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
49.099.8E-MEXP-475-raw-cel-680982521
46.799.8E-MEXP-1299-raw-cel-1519903496
46.699.8GSM131303AtGen_6-2611_Osmoticstress-Shoots-24.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
37.199.7E-MEXP-1443-raw-cel-1581869688
36.799.7E-MEXP-475-raw-cel-680982512
35.899.7GSM131295AtGen_6-2411_Osmoticstress-Shoots-6.0h_Rep1GSE5622AtGenExpress: Stress Treatments (Osmotic stress)
34.599.7GSM142784HO001_ATH1_A1-Okamo-gpal-ABAGSE6171Comparative transcriptome analysis between wild-type and gpa1 mutant in response to ABA
32.999.7E-MEXP-1299-raw-cel-1519901137
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.652e-45182At1g12090837761ELP (EXTENSIN-LIKE PROTEIN)extensin-like protein (ELP)C.G.S.X.
0.206e-1167At4g12480826860pEARLI 1a putative lipid transfer protein, vernalization-responsive and cold-inducedC.G.S.X.
0.174e-961At4g12545826867protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:molecular_function unknown;P:lipid transport;C:endomembrane system;PC.G.S.X.
0.294e-652At4g12510826863protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PC.G.S.X.
0.294e-652At4g12520826864protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PC.G.S.X.
0.162e-446At4g12550826868AIR1isolated from differential screening of a cDNA library from auxin-treated root culture. encodes a protein that is related to a large family of proteins that consist of a proline-rich or glycine-rich N-terminus and a hydrophobic, possibly membrane spanning C-terminus.C.G.S.X.
0.132e-446At4g22460828341protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PC.G.S.X.
0.091e-240At5g46890834734protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PC.G.S.X.
0.091e-240At5g46900834735protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.128e-238Glycine maxGma.7993.1.S1_atBI967267--1e-7At4g12490protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.124e-444Hordeum vulgareContig4435_atContig4435--2e-3At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.034e-136Oryza sativaOs11g0211800AK059202.1-Hypothetical protein4e-1At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.163e-1375Populus trichocarpaPtp.5748.1.S1_s_atCX657082hypothetical protein-3e-13At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.074e-342Triticum aestivumTa.18186.1.A1_atCK211882--5e-3At1g62510protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.075e-959Vitis vinifera1612791_atCF215262hypothetical protein LOC100257513-2e-8At2g45180protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.069e-236Zea maysZm.3427.1.A1_atAY108411.1cortical cell-delineating protein-9e-2At4g12545protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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