Gene omics information

Query gene ID At1g62500
Gene name protease inhibitor/seed storage/lipid transfer protein (LTP) family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8290.9At1g62500842547protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:endomembrane system;MBPOFVAS.X.H.G.
0.7184.2At4g37750829931ANT (AINTEGUMENTA)ANT is required for control of cell proliferation and encodes a putative transcriptional regulator similar to AP2. Loss of function alleles have reduced fertility, abnormal ovules and abnormal lateral organs. Expressed specifically in the chalaza and in floral organ primordia.S.X.H.G.
0.7083.5At5g28640832968AN3 (ANGUSTIFOLIA 3)Encodes a protein with similarity to mammalian transcriptional coactivator that is involved in cell proliferation during leaf and flower development. Loss of function mutations have narrow, pointed leaves and narrow floral organs. AN3 interacts with members of the growth regulating factor (GRF) family of transcription factors.S.X.H.G.
0.6882.2At5g07180830609ERL2 (ERECTA-LIKE 2)Encodes a receptor-like kinase that, together with ER and ERL1 governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes. It is also important for maintaining stomatal stem cell activity and preventing terminal differentiation of the meristemoid into the guard mother cell. When heterozygous in an er/erl1 null background, plants are female sterile due to cell division defect in the integuments.S.X.H.G.
0.6680.1At1g67040843024unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFS.X.H.G.
0.6277.3At2g26330817173ER (ERECTA)Homologous to receptor protein kinases. Involved in specification of organs originating from the shoot apical meristem. Contains a cytoplasmic protein kinase catalytic domain, a transmembrane region, and an extracellular leucine-rich repeat. ER has been identified as a quantitative trait locus for transpiration efficiency by influencing epidermal and mesophyll development, stomatal density and porosity of leaves. It has been implicated in resistance to the bacterium Ralstonia solanacearum and to the necrotrophic fungus Plectosphaerella cucumerina. Together with ERL1 and ERL2, ER governs the initial decision of protodermal cells to either divide proliferatively to produce pavement cells or divide asymmetrically to generate stomatal complexes.S.X.H.G.
0.6277.3At1g02800839385ATCEL2Encodes a protein with similarity to endo-1,4-b-glucanases and is a member of Glycoside Hydrolase Family 9. CEL2 is induced by nemotodes and is expressed in syncitia induced by Heterodera schachtii.May be involved in the development and function of syncitia.S.X.H.G.
0.6075.7At1g44760841040universal stress protein (USP) family proteinF:molecular_function unknown;P:response to stress;C:unknown;PMOS.X.H.G.
0.5974.7At5g08000830694E13L3 (GLUCAN ENDO-1,3-BETA-GLUCOSIDASE-LIKE PROTEIN 3)Encodes a member of the X8-GPI family of proteins. It localizes to the plasmodesmata and binds callose.S.X.H.G.
0.5773.8At4g30130829136unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PMFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
64.099.8GSM10453WT Mature Green Seed 2GSE680Transcript Profiling of Arabidopsis Plant Life Cycle
61.099.8GSM131696ATGE_79_CGSE5634AtGenExpress: Developmental series (siliques and seeds)
57.799.8GSM131694ATGE_79_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
56.299.8GSM131697ATGE_81_AGSE5634AtGenExpress: Developmental series (siliques and seeds)
53.999.8GSM131698ATGE_81_BGSE5634AtGenExpress: Developmental series (siliques and seeds)
53.199.8E-MEXP-728-raw-cel-1062074471
50.499.8E-MEXP-728-raw-cel-1062074538
50.199.8E-MEXP-728-raw-cel-1062073752
49.799.8GSM305284estradiol induced, biological replicate 2GSE12137LEAFY COTYLEDON1 is a key regulator of fatty acid biosynthesis in Arabidopsis thaliana
49.799.8E-MEXP-728-raw-cel-1062073620
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-344At5g21280832258hydroxyproline-rich glycoprotein family proteinF:unknown;P:unknown;C:unknown;MPOFBVAC.G.S.X.
0.042e-344At3g22120821775CWLP (CELL WALL-PLASMA MEMBRANE LINKER PROTEIN)cell wall-plasma membrane linker protein homolog (CWLP)C.G.S.X.
0.047e-342At5g19090832028heavy-metal-associated domain-containing proteinF:metal ion binding;P:metal ion transport;C:cellular_component unknown;MBOPFVAC.G.S.X.
0.027e-342At3g25590822146unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPFBC.G.S.X.
0.043e-240At5g46730834716glycine-rich proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MBOPFVAC.G.S.X.
0.033e-240At5g56840835786DNA-binding family proteinF:transcription factor activity, DNA binding, nucleic acid binding;P:regulation of transcription;C:unknown;POC.G.S.X.
0.013e-240At4g18570827588proline-rich family proteinF:unknown;P:unknown;C:unknown;MPOFBVAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e-242Glycine maxPsAffx.C22000021_atPsAffx.C22000021--4e+0At4g05070unknown proteinC.G.S.X.
0.033e-342Hordeum vulgareContig5242_atContig5242--3e-1At2g30560glycine-rich proteinC.G.S.X.
0.036e-550Oryza sativaOsAffx.16101.1.A1_at---0C.G.S.X.
0.206e-446Populus trichocarpaPtpAffx.1257.3.A1_atCA934446hypothetical protein-4e-4At1g62500protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.037e-342Triticum aestivumTaAffx.51609.1.S1_atCA722993--5e-2At5g56840DNA-binding family proteinC.G.S.X.
0.154e-857Vitis vinifera1619662_atCF404114hypothetical protein LOC100262648-1e+0At3g21360electron carrier/ oxidoreductaseC.G.S.X.
0.021e-240Zea maysZm.10389.1.A1_atAY095207.1glycine-rich protein GRP5-4e-1At5g17650glycine/proline-rich proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006869The directed movement of lipids into, out of, within or between cells. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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