Gene omics information

Query gene ID At1g62320
Gene name early-responsive to dehydration protein-related / ERD protein-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.7888.6At1g62320842530early-responsive to dehydration protein-related / ERD protein-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, membrane;FPMOS.X.H.G.
0.7788.0At5g19790832099RAP2.11 (related to AP2 11)encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family (RAP2.11). The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11.S.X.H.G.
0.6982.9At5g61650836287CYCP4The P-type cyclins (CYCPs) share a conserved central region of 100 amino acids ('cyclin box') displaying homology to the corresponding region of the PHO80 cyclin from Saccharomyces cerevisiae and the related G1 cyclins from Trypanosoma cruzi and T. brucei.S.X.H.G.
0.6882.2At1g70460843382protein kinase, putativeF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:membrane;MBOPFVAS.X.H.G.
0.6882.2At2g03720814899MRH6 (morphogenesis of root hair 6)Involved in root hair developmentS.X.H.G.
0.6781.6At5g24313832499unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6579.6At4g29180829039leucine-rich repeat protein kinase, putativeF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6176.7At4g25790828684allergen V5/Tpx-1-related family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBVAS.X.H.G.
0.6176.7At5g05500830433pollen Ole e 1 allergen and extensin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.6176.7At4g33730829515pathogenesis-related protein, putativeF:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOBS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
1052.4100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
249.3100.0GSM142750MJ001_ATH1_A1-jones-WT1GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
168.8100.0GSM142751MJ001_ATH1_A2-jones-WT2GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
146.899.9GSM142754MJ001_ATH1_A5-jones-WT-Rep3GSE6165The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
87.299.9GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
65.599.8GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
58.399.8GSM27366lec1-1 StemGSE680Transcript Profiling of Arabidopsis Plant Life Cycle
57.999.8GSM142879GW001_ATH1_A24-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
56.899.8GSM142878GW001_ATH1_A23-Warre-03fGSE6177The effects of the sfr2, sfr3 and sfr6 mutations on lyotropic stress responses
51.399.8GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.514e-164579At1g11960837748-F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;FPMOBC.G.S.X.
0.359e-2099At4g22120828301early-responsive to dehydration protein-related / ERD protein-relatedF:unknown;P:unknown;C:plasma membrane;FPMOC.G.S.X.
0.142e-1481At3g21620821716early-responsive to dehydration protein-related / ERD protein-relatedF:molecular_function unknown;P:biological_process unknown;C:plasma membrane;FPMOC.G.S.X.
0.231e-1275At4g04340825754early-responsive to dehydration protein-related / ERD protein-relatedF:unknown;P:unknown;C:plasma membrane;FPMOBC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.104e-757Glycine maxGma.5914.1.S1_atBI424971--2e-7At1g62320early-responsive to dehydration protein-related / ERD protein-relatedC.G.S.X.
0.042e-344Hordeum vulgareContig18053_atContig18053--7e-6At4g04340early-responsive to dehydration protein-related / ERD protein-relatedC.G.S.X.
0.121e-863Oryza sativaOs05g0594700AK067992.1-Hv711N16.16 (Fragment)6e-9At1g62320early-responsive to dehydration protein-related / ERD protein-relatedC.G.S.X.
0.211e-25119Populus trichocarpaPtpAffx.217360.1.S1_atpmrna32584hypothetical protein-6e-27At4g04340early-responsive to dehydration protein-related / ERD protein-relatedC.G.S.X.
0.063e-448Triticum aestivumTa.6973.2.S1_atBJ313299--2e-13At4g22120early-responsive to dehydration protein-related / ERD protein-relatedC.G.S.X.
0.023e-136Vitis vinifera1622046_atCF210832hypothetical protein LOC100257332-6e-16At4g04340early-responsive to dehydration protein-related / ERD protein-relatedC.G.S.X.
0.015e-136Zea maysZm.13816.1.A1_atAY104641.1hypothetical protein LOC100276882-6e+0At5g28950unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage