CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g61810

Gene name BGLU45 (BETA-GLUCOSIDASE 45)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.34 39.8 At1g61810 842478 BGLU45 (BETA-GLUCOSIDASE 45) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA S.X. H.G.
0.60 75.7 At1g32770 840171 ANAC012 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 12) Encodes SND1, a NAC Domain transcription factor involved in secondary wall biosynthesis in fibers. Expressed specifically in interfascicular fibers and xylary fibers in stems. Expressed in the procambium of stem inflorescences and root. May act as a negative regulator of secondary wall thickening in xylary fibers. Acts redundantly with NST1 to control development of secondary walls in siliques. S.X. H.G.
0.55 70.6 At1g22480 838854 plastocyanin-like domain-containing protein F:electron carrier activity, copper ion binding;P:unknown;C:anchored to membrane;PFO S.X. H.G.
0.55 70.6 At3g15050 820734 IQD10 (IQ-domain 10) F:calmodulin binding;P:biological_process unknown;C:chloroplast;P S.X. H.G.
0.44 57.2 At1g27380 839627 RIC2 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 2) encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC4 (family subgroup V). Gene is expressed in all tissues examined. S.X. H.G.
0.31 33.8 At4g28500 828968 ANAC073 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 73) F:transcription factor activity, transcription activator activity;P:multicellular organismal development, regulation of secondary cell wall thickening;C:nucleus;PO S.X. H.G.
0.25 22.6 At5g57520 835856 ZFP2 (ZINC FINGER PROTEIN 2) Encodes a zinc finger protein containing only a single zinc finger. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
344.5 100.0 GSM133819 Yang_1-4_old-pod_Rep2_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
335.1 100.0 GSM133821 Yang_1-6_old-pod_Rep3_ATH1 GSE5736 To identify changes in gene expression during silique senescence in Arabidopsis thaliana
193.7 100.0 E-MEXP-1451-raw-cel-1585200362
161.5 99.9 E-MEXP-1797-raw-cel-1669767976
132.6 99.9 GSM27366 lec1-1 Stem GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
85.4 99.9 E-MEXP-1797-raw-cel-1669767958
71.6 99.9 GSM131655 ATGE_27_A GSE5633 AtGenExpress: Developmental series (shoots and stems)
71.6 99.9 E-MEXP-1797-raw-cel-1669768030
70.8 99.9 GSM27362 WT Stem GSE680 Transcript Profiling of Arabidopsis Plant Life Cycle
68.4 99.9 GSM311296 Laser capture microdissected (LCM) general seed coat at the linear-cotyledon stage, biological replicate 2 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.76 0 664 At1g61820 842479 BGLU46 (BETA GLUCOSIDASE 46) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
0.08 5e-8 59 At4g21760 828264 BGLU47 (Beta-glucosidase 47) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:endomembrane system;BOPMFA C.G. S.X.
0.03 3e-3 44 At5g24540 832525 BGLU31 (BETA GLUCOSIDASE 31) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFA C.G. S.X.
0.02 3e-3 44 At3g60120 825182 BGLU27 (BETA GLUCOSIDASE 27) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:cellular_component unknown;BOPMFA C.G. S.X.
0.03 1e-2 42 At5g24550 832526 BGLU32 (BETA GLUCOSIDASE 32) F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to other organism;C:endomembrane system;BOPMFA C.G. S.X.
0.01 2e-1 38 At5g57830 835893 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBA C.G. S.X.
0.03 2e-1 38 At3g02493 5007978 RTFL19 (ROTUNDIFOLIA LIKE 19) F:unknown;P:shoot development;C:unknown;P C.G. S.X.
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Orthologous genes

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HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 2e-2 42 Glycine max GmaAffx.87547.3.S1_at BG507836 - - 3e-3 At1g61810 BGLU45 (BETA-GLUCOSIDASE 45) C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig20237_at Contig20237 - - 1e+0 At1g61810 BGLU45 (BETA-GLUCOSIDASE 45) C.G. S.X.
0.03 1e-1 40 Oryza sativa Os04g0474600 9632.m03783 - Beta-primeverosidase (EC 3.2.1.149) 5e-5 At5g42260 BGLU12 (BETA GLUCOSIDASE 12) C.G. S.X.
0.05 3e-1 38 Populus trichocarpa PtpAffx.203696.1.S1_at pmrna7321 - - 2e-19 At4g21760 BGLU47 (Beta-glucosidase 47) C.G. S.X.
0.02 2e-1 38 Triticum aestivum TaAffx.64846.1.A1_at BJ272879 - - 6e-1 At3g17675 copper ion binding / electron carrier C.G. S.X.
0.02 1e-2 40 Vitis vinifera 1620679_at CB972076 hypothetical protein LOC100255914 - 2e-16 At3g18070 BGLU43 (BETA GLUCOSIDASE 43) C.G. S.X.
0.02 5e+0 32 Zea mays ZmAffx.375.1.A1_at AI673907 - - 3e+0 At1g35340 ATP-dependent protease La (LON) domain-containing protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0005975 The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00412 Glycoside Hydrolase

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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