Gene omics information

Query gene ID At1g61610
Gene name S-locus lectin protein kinase family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5570.6At1g61610842457S-locus lectin protein kinase family proteinF:in 6 functions;P:protein amino acid phosphorylation, recognition of pollen;C:endomembrane system;MPOBFVAS.X.H.G.
0.3643.6At1g61120842405TPS04 (TERPENE SYNTHASE 04)Encodes a geranyllinalool synthase that produces a precursor to TMTT, a volatile plant defense C16-homoterpene. GES transcript levels rise in response to alamethicin, a fungal peptide mixture that damages membranes. This transcriptional response is blocked in JA biosynthetic and JA signaling mutants, but GES transcript levels still rise in response to alamethicin in mutants with salicylic acid and ethylene biosynthetic and/or signaling defects. GES transcripts also accumulate in response to a larval infestation. This enzyme does not localize to the plastids, and it may be present in the cytosol or endoplasmic reticulum.S.X.H.G.
0.1710.2At3g44860823620FAMT (farnesoic acid carboxyl-O-methyltransferase)Encodes a farnesoic acid carboxyl-O-methyltransferase.S.X.H.G.
0.168.8At1g17420838314LOX3LipoxygenaseS.X.H.G.
0.157.8At5g13220831162JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10)Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa.S.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
564.2100.0GSM184551Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
159.499.9GSM128654Underwood_1-7_DC3000-10e6-24h_Rep1_ATH1GSE5520Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
121.599.9GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
114.699.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
106.699.9GSM128720Pieterse_1-6_avrPstDC3000-24h_Rep1_ATH1GSE5525Transcriptome changes of Arabidopsis during pathogen and insect attack
90.799.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
88.899.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
84.399.9E-MEXP-807-raw-cel-1173273060
74.399.9GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
72.599.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.032e-1275At4g21230827872protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.042e-861At1g11350837677SD1-13 (S-DOMAIN-1 13)F:protein serine/threonine kinase activity, protein kinase activity, kinase activity;P:protein amino acid autophosphorylation;C:plasma membrane;MPOBFVAC.G.S.X.
0.049e-859At4g21380827890ARK3 (A. THALIANA RECEPTOR KINASE 3)encodes a putative receptor-like serine/threonine protein kinases that is similar to Brassica self-incompatibility (S) locus. Expressed in root. Shoot expression limited to limited to the root-hypocotyl transition zone and at the base of lateral roots as well as in axillary buds, and pedicels.C.G.S.X.
0.049e-859At1g65790842890ARK1 (A. THALIANA RECEPTOR KINASE 1)An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain.C.G.S.X.
0.103e-757At4g21390827891B120F:protein serine/threonine kinase activity, sugar binding, protein kinase activity, ATP binding;P:protein amino acid phosphorylation, recognition of pollen;C:plasma membrane;MPOBFVAC.G.S.X.
0.043e-757At4g21370827889S-locus protein kinase, putativeThe Col-0 pseudoSRKA allele contains a frameshift mutation that introduces a premature stop codon within the fourth of seven exons found in SRK genes. Its SCR sequences consist of several truncated pseudoSCR sequences, the longest of which is designated pseudoSCR1.C.G.S.X.
0.061e-656At4g05200825868protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.025e-654At4g23320828431protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:unknown;MPOBFVAC.G.S.X.
0.035e-654At4g23280828427protein kinase, putativeF:kinase activity;P:defense response;C:chloroplast;MPOBFVAC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-552Glycine maxGmaAffx.24407.1.S1_atBF071319--1e-10At1g11330S-locus lectin protein kinase family proteinC.G.S.X.
0.061e-552Hordeum vulgareContig18728_atContig18728--6e-6At1g61610S-locus lectin protein kinase family proteinC.G.S.X.
0.067e-1067Oryza sativaOs07g0551300AK102758.1-KI domain interacting kinase 14e-10At1g61610S-locus lectin protein kinase family proteinC.G.S.X.
0.095e-1067Populus trichocarpaPtpAffx.224722.1.S1_atpmrna43534hypothetical protein-1e-12At4g21390B120C.G.S.X.
0.055e-344Triticum aestivumTaAffx.29175.1.S1_atCA648855--1e-3At1g61610S-locus lectin protein kinase family proteinC.G.S.X.
0.024e-756Vitis vinifera1611358_atCD006705--9e-8At1g61370S-locus lectin protein kinase family proteinC.G.S.X.
0.021e-138Zea maysZm.13669.2.A1_atBM350396--2e-9At4g02630protein kinase family proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006468The process of introducing a phosphate group on to a protein.
LGO:0048544The process, involving the sharing and interaction of the single locus incompatibility haplotypes, involved in the recognition or rejection of the self pollen by cells in the stigma. This process ensures out-breeding in certain plant species.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage