CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g60680

Gene name aldo/keto reductase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.52 67.4 At1g60680 842362 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOMFPA S.X. H.G.
0.74 86.1 At1g78000 844135 SULTR1 Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes. S.X. H.G.
0.72 84.8 At2g28960 817445 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.72 84.8 At1g49310 841354 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.71 84.2 At1g31885 840079 transporter F:transporter activity;P:transport;C:integral to membrane, membrane;BPOMFAV S.X. H.G.
0.70 83.5 At2g29995 817550 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.69 82.9 At5g05400 830422 disease resistance protein (CC-NBS-LRR class), putative F:protein binding, ATP binding;P:N-terminal protein myristoylation, defense response, apoptosis;C:chloroplast;PMBOFA S.X. H.G.
0.69 82.9 At3g18560 821387 unknown protein F:unknown;P:unknown;C:unknown;P S.X. H.G.
0.66 80.1 At3g24290 822017 AMT1 F:ammonium transmembrane transporter activity;P:ammonium transport, transport;C:endomembrane system, membrane;OBMFPA S.X. H.G.
0.65 79.6 At2g23030 816833 SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9) encodes a member of SNF1-related protein kinases (SnRK2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
75.6 99.9 GSM133304 RIKEN-NAKABAYASHI1B GSE5700 AtGenExpress: Effect of ABA during seed imbibition
72.2 99.9 GSM133303 RIKEN-NAKABAYASHI1A GSE5700 AtGenExpress: Effect of ABA during seed imbibition
54.9 99.8 GSM75519 slr-1 0h NAA replicate 2 GSE3350 SLR/IAA14-dependent auxin induced lateral root initiation
47.9 99.8 E-ATMX-31-raw-cel-1516947984
45.1 99.8 E-ATMX-31-raw-cel-1516948018
44.2 99.8 GSM311294 Laser capture microdissected (LCM) chalazal seed coat at the linear-cotyledon stage, biological replicate 2 GSE12403 Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
44.2 99.8 GSM265425 Arabidopsis, root, longitudinal zone 4, standard conditions, rep 2 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
43.9 99.8 E-MEXP-828-raw-cel-1156922708
43.6 99.8 E-MEXP-828-raw-cel-1156922731
43.3 99.8 GSM265424 Arabidopsis, root, longitudinal zone 4, standard conditions, rep 1 GSE10497 Expression analysis of root developmental zones after iron deficiency (-Fe) treatment
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.85 0 795 At1g60730 842367 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:unknown;BOFMPA C.G. S.X.
0.80 0 706 At1g60710 842365 ATB2 Encodes ATB2. C.G. S.X.
0.84 0 702 At1g60690 842363 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:plasma membrane, chloroplast envelope;BOFMPA C.G. S.X.
0.59 4e-94 345 At1g10810 837624 aldo/keto reductase family protein F:oxidoreductase activity, aldo-keto reductase activity;P:oxidation reduction;C:cellular_component unknown;BOFMPA C.G. S.X.
0.02 3e-2 40 At3g10920 820263 MSD1 (MANGANESE SUPEROXIDE DISMUTASE 1) manganese superoxide dismutase (MSD1) C.G. S.X.
0.01 5e-1 36 At5g06830 830574 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOPABF C.G. S.X.
0.02 5e-1 36 At3g47690 823923 ATEB1A encodes a homolog of animal microtubule-end-binding protein. There are two other members of this family. EB1 forms foci at regions where the minus ends of microtubules are gathered during mitosis and early cytokinesis. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 1e-17 91 Glycine max Gma.7410.3.S1_s_at CA784836 - - 2e-34 At1g60730 aldo/keto reductase family protein C.G. S.X.
0.14 7e-8 57 Hordeum vulgare Contig3852_at Contig3852 - - 6e-23 At1g60730 aldo/keto reductase family protein C.G. S.X.
0.22 3e-16 87 Oryza sativa Os04g0337800 9632.m02530 - Aldo/keto reductase family protein 1e-16 At1g60680 aldo/keto reductase family protein C.G. S.X.
0.29 2e-29 131 Populus trichocarpa PtpAffx.454.3.S1_a_at CV281143 hypothetical protein - 2e-29 At1g60680 aldo/keto reductase family protein C.G. S.X.
0.12 1e-1 38 Triticum aestivum Ta.5105.2.S1_a_at CA606778 - - 2e-14 At1g60710 ATB2 C.G. S.X.
0.14 5e-20 97 Vitis vinifera 1610003_a_at BQ796251 hypothetical protein LOC100241166 - 9e-23 At1g60730 aldo/keto reductase family protein C.G. S.X.
0.24 7e-17 87 Zea mays Zm.7859.1.S1_at AY107154.1 aldo/keto reductase AKR1 /// auxin-induced protein PCNT115 - 2e-16 At1g60680 aldo/keto reductase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0055114 The process of removal or addition of one or more electrons with or without the concomitant removal or addition of a proton or protons.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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