Gene omics information

Query gene ID At1g60500
Gene name dynamin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g60500842345dynamin family proteinF:GTP binding, GTPase activity;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.5673.0At3g53060824472ASK6 (ARABIDOPSIS SKP1-LIKE 6)F:ubiquitin-protein ligase activity, protein binding;P:ubiquitin-dependent protein catabolic process;C:SCF ubiquitin ligase complex;MPFOVS.X.H.G.
0.5570.6At3g24330822022glycosyl hydrolase family 17 proteinF:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:carbohydrate metabolic process;C:anchored to membrane;PFBOS.X.H.G.
0.5570.6At2g35970818170harpin-induced family protein / HIN1 family protein / harpin-responsive family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At1g35900840492unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5368.6At2g34580818022unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMBFPAVS.X.H.G.
0.5368.6At3g44140823535unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.5267.4At1g60280842323ANAC023 (Arabidopsis NAC domain containing protein 23)F:transcription factor activity;P:regulation of transcription;C:cellular_component unknown;PS.X.H.G.
0.5267.4At3g223403768898transposable element geneF:unknown;P:unknown;C:unknownS.X.H.G.
0.5267.4At4g23580828458kelch repeat-containing F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MPOBVFS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
519.5100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
507.1100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
376.0100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
360.7100.0GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
319.4100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
290.2100.0GSM143306High_Na_seg_pool_tsu_col_F2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
289.2100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
278.6100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
267.4100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
261.4100.0GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.490850At1g60530842348dynamin family proteinF:GTP binding, GTPase activity;P:biological_process unknown;C:cellular_component unknown;MFPOC.G.S.X.
0.016e-240At4g24710828573ATP binding / ATPase/ nucleoside-triphosphatase/ nucleotide bindingF:nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding;P:unknown;C:unknown;BOMFPAVC.G.S.X.
0.013e-138At2g23140816846binding / ubiquitin-protein ligaseF:ubiquitin-protein ligase activity, binding;P:protein ubiquitination;C:ubiquitin ligase complex;OPMFBVAC.G.S.X.
0.013e-138At1g76680844001OPR1Encodes a a member of an alpha/beta barrel fold family of FMN-containing oxidoreductases. One of two closely related 12-oxophytodienoic acid reductases. This enzyme is not expected to participate in jasmonic acid biosynthesis because during in vitro assays, it shows very little activity with the naturally occurring OPDA isomer. Up-regulated by senescence and jasmonic acid. Induced by salicylic acid. Independent of NPR1 for their induction by salicylic acid.C.G.S.X.
0.011e+036At5g65440836669unknown proteinF:unknown;P:biological_process unknown;C:plasma membrane;POC.G.S.X.
0.011e+036At2g28320817379pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing proteinF:phosphoinositide binding;P:signal transduction;C:plasma membrane;PMOC.G.S.X.
0.014e+034At5g23740832439RPS11-BETA (RIBOSOMAL PROTEIN S11-BETA)Encodes a putative ribosomal protein S11 (RPS11-beta).C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.026e+034Glycine maxPsAffx.C50000002_atPsAffx.C50000002--9e-1At1g80840WRKY40C.G.S.X.
0.012e+034Hordeum vulgareContig16107_atContig16107--2e+0At3g09980unknown proteinC.G.S.X.
0.015e-138Oryza sativaOs.48069.1.S1_at---0C.G.S.X.
0.131e-759Populus trichocarpaPtpAffx.218944.1.S1_s_atpmrna34708hypothetical protein-3e-8At1g60500dynamin family proteinC.G.S.X.
0.024e+034Triticum aestivumTa.9715.2.S1_atBJ314240--8e-8At1g32850UBP11 (UBIQUITIN-SPECIFIC PROTEASE 11)C.G.S.X.
0.012e-240Vitis vinifera1618877_atCF213678hypothetical protein LOC100252486-2e-24At5g11490adaptin family proteinC.G.S.X.
0.014e-136Zea maysZmAffx.901.1.A1_atAI770894--1e+1At5g47455unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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