Gene omics information

Query gene ID At1g56330
Gene name ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.3745.0At1g56330842086ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)Encodes a small GTP-binding protein implicated in ER to cis-Golgi transport of other proteins. A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases. The protein is found associated to the ER and free in the cytosol.S.X.H.G.
0.7385.5At4g29480829069mitochondrial ATP synthase g subunit family proteinF:hydrogen ion transmembrane transporter activity;P:proton transport, ATP synthesis coupled proton transport;C:mitochondrion;POS.X.H.G.
0.7184.2At4g00860826213ATOZI1putative pathogenesis-related protein whose transcript level is induced in response to ozone and pathogenic Pseudomonas strains.S.X.H.G.
0.6781.6At5g47570834807unknown proteinF:molecular_function unknown;P:biological_process unknown;C:respiratory chain complex I;POS.X.H.G.
0.6478.9At5g67590836895FRO1 (FROSTBITE1)Mutant leaves have a reduced capacity for cold acclimation, appear water-soaked, leak electrolytes, and accumulate reactive oxygen species constitutively. Encode a protein with high similarity to the 18-kD Fe-S subunit of complex I (NADH dehydrogenase, EC 1.6.5.3) in the mitochondrial electron transfer chain.S.X.H.G.
0.6378.1At5g52840835361NADH-ubiquinone oxidoreductase-relatedF:oxidoreductase activity, acting on NADH or NADPH;P:photorespiration;C:mitochondrion, mitochondrial membrane, chloroplast, respiratory chain complex I, membrane;MFPOS.X.H.G.
0.6277.3At2g44620819070MTACP-1 (MITOCHONDRIAL ACYL CARRIER PROTEIN 1)Encodes a member of the mitochondrial acyl carrier protein (ACP) family. As part of the mitochondrial matrix, it is likely to be involved in fatty acid or lipoic acid biogenesis. Its acylated form is predominantly present in the mitochondrial membrane while the non-acylated form is soluble.S.X.H.G.
0.5873.8At2g33040817866ATP synthase gamma chain, mitochondrial (ATPC)F:hydrogen ion transporting ATP synthase activity, rotational mechanism, proton-transporting ATPase activity, rotational mechanism;P:proton transport, ATP synthesis coupled proton transport;C:in 7 components;OBMFPAS.X.H.G.
0.5570.6At4g34700829622complex 1 family protein / LVR family proteinF:catalytic activity;P:photorespiration;C:mitochondrial membrane, plasma membrane, respiratory chain complex I;MFPOS.X.H.G.
0.5469.5At2g42210818821mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family proteinHomologous to pea OEP16 and barley pPORA (OEP16), a member of Arabidopsis OEP16 family.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.099.4GSM133779Lindsey_1-5_globular-basal_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
11.199.2GSM133981Birnbaum_1-11_StageII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis root
10.699.2GSM133983Birnbaum_1-13_StageIII-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
10.499.2GSM226536L6SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.499.1GSM133758Lindsey_1-11_heart-stage-root_Rep2_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
9.499.1GSM133978Birnbaum_1-8_StageII-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
9.299.1GSM226534L4SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
9.199.1GSM133756Lindsey_1-10_heart-stage-root_Rep1_ATH1GSE5730Transcriptional profiling of laser-capture micro-dissected embryonic tissues
8.899.0GSM226535L5SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
8.699.0GSM133985Birnbaum_1-15_StageIII-4_Rep4_ATH1GSE5749A gene expression map of the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.867e-147519At1g09180837438ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.C.G.S.X.
0.622e-88325At4g02080827368ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.C.G.S.X.
0.599e-57220At3g62560825430GTP-binding protein, putativeF:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MOFPBAC.G.S.X.
0.295e-1581At1g02620839269GTP-binding protein (SAR1A)F:GTP binding;P:intracellular protein transport;C:endomembrane system, intracellular;MPOFC.G.S.X.
0.037e-238At3g49860824148ATARLA1B (ADP-ribosylation factor-like A1B)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.C.G.S.X.
0.037e-238At3g49870824149ATARLA1C (ADP-ribosylation factor-like A1C)A member of ARF-like GTPase family. A thaliana has 21 members, in two subfamilies, ARF and ARF-like (ARL) GTPases.C.G.S.X.
0.043e-136At2g24765817014ARF3 (ADP-RIBOSYLATION FACTOR 3)GTPase required for Golgi targeting of GRIP domain proteins. AtARL1 binds directly to the GRIP domain of AtGRIP in a GTP-dependent mannerC.G.S.X.
0.011e+034At5g10180830882AST68Encodes a low-affinity sulfate transporter expressed in the root cap and central cylinder, where it is induced by sulfur starvation. Expression in the shoot vascular system is not induced by sulfur starvation.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.468e-61234Glycine maxGma.2547.1.S1_a_atAW432827--2e-50At1g56330ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)C.G.S.X.
0.455e-35147Hordeum vulgareContig3844_atContig3844--5e-47At4g02080ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2)C.G.S.X.
0.343e-30133Oryza sativaOs01g0338000AK112012.1-GTP-binding protein SAR1A1e-45At3g62560GTP-binding protein, putativeC.G.S.X.
0.572e-55216Populus trichocarpaPtpAffx.31782.2.A1_a_atCV272415gtp-binding protein SAR1-4e-47At1g09180ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)C.G.S.X.
0.443e-26119Triticum aestivumTa.7164.1.S1_atBJ229457--8e-68At3g62560GTP-binding protein, putativeC.G.S.X.
0.542e-61234Vitis vinifera1619077_atCF513582hypothetical protein LOC100256889-1e-60At1g56330ATSAR1B (SECRETION-ASSOCIATED RAS 1 B)C.G.S.X.
0.444e-29127Zea maysZm.14470.2.A1_atBQ487244GTP-binding protein SAR1A-7e-22At1g09180ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
SGO:0048221The directed movement of substances from the rough endoplasmic reticulum to the cis-Golgi, mediated by small transport vesicles.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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