Gene omics information

Query gene ID At1g56320
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5267.4At1g56320842085unknown proteinF:molecular_function unknown;P:biological_process unknown;C:anchored to membrane;PS.X.H.G.
0.8994.6At2g35380818105peroxidase 20 (PER20) (P20)F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBS.X.H.G.
0.8894.0At5g37690833748GDSL-motif lipase/hydrolase family proteinF:lipase activity, hydrolase activity, acting on ester bonds;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.8693.1At4g20390827787integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PS.X.H.G.
0.8491.9At5g58860836003CYP86A1 (CYTOCHROME P450 86 A1)Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed significantly only in root tissue.S.X.H.G.
0.8290.9At1g78990844239transferase family proteinF:transferase activity, transferring acyl groups other than amino-acyl groups, transferase activity;P:biological_process unknown;C:cellular_component unknown;PFBS.X.H.G.
0.8290.9At2g23540816886GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:endomembrane system;PBFOMS.X.H.G.
0.8089.8At5g44550834482integral membrane family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.7184.2At2g47200819333unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5873.8At4g38080829964hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOVBFAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
375.2100.0GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
211.7100.0GSM226541L11SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
169.5100.0GSM226554Slice12JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
149.999.9GSM184846Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 2GSE7639Expression analysis of root developmental zones after treatment with salt
147.499.9GSM184845Arabidopsis, root, longitudinal zone 4, standard conditions, NaCl, replicate 1GSE7639Expression analysis of root developmental zones after treatment with salt
110.999.9GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
97.799.9GSM226553Slice11JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
88.099.9GSM184933Arabidopsis, whole roots, 140 mM NaCl, 16 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
76.199.9GSM184837Arabidopsis, root, longitudinal zone 4, standard conditions, replicate 7GSE7639Expression analysis of root developmental zones after treatment with salt
70.099.9GSM184931Arabidopsis, whole roots, 140 mM NaCl, 4 hour, replicate 1GSE7642Time course expression analysis of the salt stress response in Arabidopsis roots
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.029e-134At2g35000818064zinc finger (C3HC4-type RING finger) family proteinE3 ligase-like protein induced by chitin oligomers.C.G.S.X.
0.039e-134At2g42860818886unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPVC.G.S.X.
0.024e+032At5g24450832516unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVC.G.S.X.
0.014e+032At5g07360830627amidase family proteinF:amidase activity, carbon-nitrogen ligase activity, with glutamine as amido-N-donor;P:acrylonitrile catabolic process, aldoxime metabolic process;C:unknown;BOFMPAC.G.S.X.
0.004e+032At5g40450834043unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast, plasma membrane;MOBFPAVC.G.S.X.
0.034e+032At3g25480822132rhodanese-like domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast thylakoid membrane, chloroplast;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.045e+032Glycine maxGmaAffx.77180.1.S1_atBM885137--3e+0At2g23348unknown proteinC.G.S.X.
0.032e+032Hordeum vulgareHD11L13r_atHD11L13r--6e-2At1g68330unknown proteinC.G.S.X.
0.037e+032Oryza sativaOsAffx.26681.1.S1_at---0C.G.S.X.
0.032e+130Populus trichocarpaPtpAffx.94700.1.A1_atCV275220--1e+0At4g19540INDL (IND1(IRON-SULFUR PROTEIN REQUIRED FOR NADH DEHYDROGENASE)-LIKE)C.G.S.X.
0.044e+032Triticum aestivumTa.19412.2.S1_a_atCA651374--1e-12At1g16740ribosomal protein L20 family proteinC.G.S.X.
0.031e+032Vitis vinifera1616439_atBQ799447hypothetical protein LOC100254870-7e-8At5g56180ATARP8 (ACTIN-RELATED PROTEIN 8)C.G.S.X.
0.036e+030Zea maysZmAffx.979.1.A1_atAI833962UBP26-8e-1At3g15140exonuclease family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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