Gene omics information

Query gene ID At1g55240
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g55240841967unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;MPS.X.H.G.
0.8089.8At1g14240837985nucleoside phosphatase family protein / GDA1/CD39 family proteinF:hydrolase activity;P:biological_process unknown;C:cellular_component unknown;MFPOBS.X.H.G.
0.4050.8At1g72140843545proton-dependent oligopeptide transport (POT) family proteinF:transporter activity;P:oligopeptide transport, response to nematode;C:plasma membrane, membrane;BPMOFS.X.H.G.
0.3338.1At3g46700823823UDP-glycosyltransferase/ transferase, transferring glycosyl groupsF:UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:unknown;PMBVOFS.X.H.G.
0.114.1At5g44380834464FAD-binding domain-containing proteinF:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:response to oxidative stress;C:cell wall;BFOPAMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
140.999.9GSM184908Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 2GSE7641Expression analysis of root cell-types after treatment with salt
121.499.9GSM184907Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 1GSE7641Expression analysis of root cell-types after treatment with salt
109.099.9GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
75.899.9GSM266665Arabidopsis, root cells, epidermis and lateral root cap, -Fe, replicate 4GSE10501Expression analysis of root cell-types after iron deficiency (-Fe) treatment
75.199.9GSM184478Lateral Root Cap root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
61.799.8GSM184909Arabidopsis, root cells, epidermis and lateral root cap, 140 mM NaCl, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
55.599.8E-MEXP-1468-raw-cel-1591138820
55.199.8GSM131190AtGen_D-23_2-UL_REP2_ATH1GSE5617AtGenExpress: Light treatments
55.099.8GSM131175AtGen_D-7_1-UL_REP1_ATH1GSE5617AtGenExpress: Light treatments
52.399.8GSM282701Col_mock_rep2GSE11216Brassinazole treatment of arf2 and wild-type dark-grown seedlings
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.538e-49194At1g55230841966unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;MPC.G.S.X.
0.051e-1067At1g55220841965unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.058e-652At5g19870832108unknown proteinF:unknown;P:unknown;C:endomembrane system;MPC.G.S.X.
0.011e-138At3g51070824271dehydration-responsive protein-relatedF:unknown;P:biological_process unknown;C:unknown;MOBFPVAC.G.S.X.
0.035e-136At5g57400835846unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.025e-136At5g08120830707MBP2C (MICROTUBULE BINDING PROTEIN 2C)Microtubule-associated and viral movement protein binding protein. Negatively regulates KN1 association to plasmodesmata and, consequently, cell-to-cell transport. Involved in the alignment of cortical microtubules, the patterning of stomata and in restricting tobamoviral infections.C.G.S.X.
0.032e+034At5g59300836048UBC7 (UBIQUITIN CARRIER PROTEIN 7)ubiquitin conjugating enzyme E2C.G.S.X.
0.012e+034At5g20590832181unknown proteinF:unknown;P:biological_process unknown;C:endomembrane system;PC.G.S.X.
0.012e+034At5g66470836779GTP binding / RNA bindingF:RNA binding, GTP binding;P:unknown;C:chloroplast;BOMAPFC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.036e-136Glycine maxGmaAffx.41503.1.A1_atBI971058--7e-1At1g02610zinc finger (C3HC4-type RING finger) family proteinC.G.S.X.
0.039e-134Hordeum vulgareContig18153_atContig18153--4e+0At5g63440unknown proteinC.G.S.X.
0.051e-242Oryza sativaOs09g0444900AK066356.1--8e-3At1g55240unknown proteinC.G.S.X.
0.107e-756Populus trichocarpaPtpAffx.73624.1.S1_atDN493341--6e-7At1g55240unknown proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.8679.1.S1_atCA621692--3e+0At4g15733SCRL11 (SCR-Like 11)C.G.S.X.
0.141e-2099Vitis vinifera1616554_atCB921630--3e-20At1g55240unknown proteinC.G.S.X.
0.031e+130Zea maysZmAffx.351.1.A1_atAI670538--2e+1At5g40020pathogenesis-related thaumatin family proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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