CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g54570

Gene name esterase/lipase/thioesterase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.53 68.6 At1g54570 841899 esterase/lipase/thioesterase family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, catalytic activity;P:unknown;C:chloroplast, plastoglobule;BMPOF S.X. H.G.
0.67 81.6 At1g02470 837812 - F:molecular_function unknown;P:biological_process unknown;C:chloroplast;BOP S.X. H.G.
0.67 81.6 At4g18980 827634 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.44 57.2 At4g24000 828500 ATCSLG2 encodes a protein similar to cellulose synthase S.X. H.G.
0.15 7.8 At1g51440 841569 lipase class 3 family protein F:triacylglycerol lipase activity;P:lipid metabolic process;C:chloroplast;POFBMV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
296.6 100.0 GSM131608 ATGE_42_D GSE5632 AtGenExpress: Developmental series (flowers and pollen)
263.8 100.0 GSM131607 ATGE_42_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
263.6 100.0 GSM131606 ATGE_42_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
128.6 99.9 GSM133731 Buchanan-Wollaston_A-3-bwoll-C0S_SLD GSE5727 The effects of mutants in stress response pathways on gene expression during senescence
125.0 99.9 GSM131604 ATGE_41_B GSE5632 AtGenExpress: Developmental series (flowers and pollen)
120.2 99.9 GSM131603 ATGE_41_A GSE5632 AtGenExpress: Developmental series (flowers and pollen)
119.1 99.9 GSM74902 ice1_no treatment_Rep1 GSE3326 ICE1 regulation of the Arabidopsis Cold-Responsive Transcriptome
114.9 99.9 GSM131537 ATGE_25_A GSE5630 AtGenExpress: Developmental series (leaves)
113.3 99.9 GSM131539 ATGE_25_C GSE5630 AtGenExpress: Developmental series (leaves)
112.7 99.9 GSM131605 ATGE_41_C GSE5632 AtGenExpress: Developmental series (flowers and pollen)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.01 7e-2 40 At3g26290 822232 CYP71B26 putative cytochrome P450 C.G. S.X.
0.01 7e-2 40 At2g13690 815853 PRLI-interacting factor, putative F:transcription regulator activity;P:biological_process unknown;C:unknown;P C.G. S.X.
0.01 3e-1 38 At5g41120 834114 esterase/lipase/thioesterase family protein F:catalytic activity, acyltransferase activity;P:metabolic process;C:cellular_component unknown;BPMO C.G. S.X.
0.01 3e-1 38 At3g02030 821242 hydrolase, alpha/beta fold family protein F:transferase activity, transferring acyl groups other than amino-acyl groups, acyltransferase activity;P:metabolic process;C:unknown;BPOM C.G. S.X.
0.01 1e+0 36 At4g00230 827949 XSP1 (xylem serine peptidase 1) F:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:cell wall, plant-type cell wall;BPOFMA C.G. S.X.
0.01 1e+0 36 At3g04790 819639 ribose 5-phosphate isomerase-related F:ribose-5-phosphate isomerase activity;P:defense response to bacterium, reductive pentose-phosphate cycle;C:thylakoid, chloroplast thylakoid membrane, chloroplast stroma, chloroplast, chloroplast envelope;BOAFMP C.G. S.X.
0.01 1e+0 36 At3g11720 820344 unknown protein F:molecular_function unknown;P:biological_process unknown;C:plasma membrane;OMFBPV C.G. S.X.
0.01 1e+0 36 At1g67040 843024 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.14 5e-25 117 Glycine max GmaAffx.63157.1.S1_at BF068676 - - 1e-25 At1g54570 esterase/lipase/thioesterase family protein C.G. S.X.
0.06 8e-3 42 Hordeum vulgare Contig16321_at Contig16321 - - 1e-2 At1g54570 esterase/lipase/thioesterase family protein C.G. S.X.
0.04 6e-4 48 Oryza sativa Os01g0362100 AK065319.1 - Esterase/lipase/thioesterase domain containingprotein 3e-4 At1g54570 esterase/lipase/thioesterase family protein C.G. S.X.
0.23 4e-13 77 Populus trichocarpa PtpAffx.222729.1.S1_at pmrna40331 hypothetical protein - 3e-13 At1g54570 esterase/lipase/thioesterase family protein C.G. S.X.
0.04 7e-5 50 Triticum aestivum TaAffx.99246.1.S1_at BG909536 - - 3e-5 At1g54570 esterase/lipase/thioesterase family protein C.G. S.X.
0.01 8e-2 38 Vitis vinifera 1621721_at CD718881 hypothetical protein LOC100248049 - 3e-17 At5g08320 unknown protein C.G. S.X.
0.01 5e-1 36 Zea mays Zm.13325.1.S1_at BQ279643 - - 3e+0 At4g27140 2S seed storage protein 1 / 2S albumin storage protein / NWMU1-2S albumin 1 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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