Gene omics information

Query gene ID At1g54410
Gene name dehydrin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.103.4At1g54410841883dehydrin family proteinF:molecular_function unknown;P:response to water, response to stress;C:chloroplast;OMPFBS.X.H.G.
0.4050.8At4g32350829369unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMPFBVS.X.H.G.
0.3338.1At1g03970839356GBF4encodes a basic leucine zipper G-box binding factor that can bind to G-box motifs only as heterodimers with GBF2 or GBF3. A single amino acid change can confer G-box binding as homodimers.S.X.H.G.
0.071.9At5g07920830686DGK1 (DIACYLGLYCEROL KINASE1)diacylglycerol kinaseS.X.H.G.
0.061.4At5g63905836511unknown proteinF:molecular_function unknown;P:N-terminal protein myristoylation;C:cellular_component unknown;PBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
163.999.9GSM226530LCOLUMELLASBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
105.799.9GSM284393Arabidopsis GCE2GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
75.599.9GSM284392Arabidopsis GCE1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
75.299.9GSM311280Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 2GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
65.599.8GSM284394Arabidopsis GCE3GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
63.899.8GSM226542L12SBGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
60.999.8GSM311279Laser capture microdissected (LCM) chalazal endosperm at the pre-globular stage, biological replicate 1GSE12402Expression data from Arabidopsis seed compartments at the pre-globular stage
54.999.8GSM284397Arabidopsis GGSc1GSE11262Expression data from Arabidopsis Seed Compartments at the Globular Embryo Stage.
54.499.8GSM226548Slice6JWGSE8934A high resolution organ expression map reveals novel expression patterns and predicts cellular function
52.399.8GSM311292Laser capture microdissected (LCM) chalazal endosperm at the linear-cotyledon stage, biological replicate 2GSE12403Expression data from Arabidopsis seed compartments at the linear-cotyledon stage
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.079e-340At1g62790842578protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinF:lipid binding;P:lipid transport;C:anchored to membrane;PC.G.S.X.
0.034e-238At3g20860821634ATNEK5 (NIMA-RELATED KINASE5)Encodes a member of the NIMA-related serine/threonine kinases (Neks) that have been linked to cell-cycle regulation in fungi and mammals. Plant Neks might be involved in plant development processes.C.G.S.X.
0.031e-136At4g35985829753senescence/dehydration-associated protein-relatedF:unknown;P:unknown;C:chloroplast;MPFOC.G.S.X.
0.021e-136At3g02210821245COBL1 (COBRA-LIKE PROTEIN 1 PRECURSOR)F:unknown;P:biological_process unknown;C:anchored to membrane;PC.G.S.X.
0.026e-134At4g27000828808ATRBP45CF:RNA binding;P:unknown;C:unknown;MPFOBAVC.G.S.X.
0.046e-134At4g02520827931ATGSTF2 (GLUTATHIONE S-TRANSFERASE PHI 2)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). The expression of this gene is upregulated by herbicide safeners such as benoxacor and fenclorim.C.G.S.X.
0.046e-134At2g02930814822ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3)Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).C.G.S.X.
0.032e+032At5g50200835085WR3 (WOUND-RESPONSIVE 3)Wound-responsive gene 3 (WR3). Encodes a high-affinity nitrate transporter. Up-regulated by nitrate. Involved in jasmonic acid-independent wound signal transduction.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.108e-444Glycine maxGmaAffx.59014.1.S1_s_atAW733977--1e-3At1g54410dehydrin family proteinC.G.S.X.
0.127e-236Hordeum vulgareContig4809_atContig4809--9e-2At1g64370unknown proteinC.G.S.X.
0.124e-342Oryza sativaOs03g0655400D26538.1-CAS15 (Cold acclimation responsive proteinBudCAR4) (Cold acclimation responsive protein BudCAR6)5e-3At1g54410dehydrin family proteinC.G.S.X.
0.152e-446Populus trichocarpaPtpAffx.212236.1.S1_x_atpmrna23988--4e-4At1g54410dehydrin family proteinC.G.S.X.
0.132e-446Triticum aestivumTa.28784.1.S1_x_atU73215.1cold acclimation protein WCOR825-2e-4At1g54410dehydrin family proteinC.G.S.X.
0.044e-236Vitis vinifera1617166_s_atCA808041ripening-related protein-like-4e-1At1g54410dehydrin family proteinC.G.S.X.
0.056e-236Zea maysZm.16929.1.S1_atAW055615dehydrin 13-9e-2At1g64370unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006950A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a disturbance in organismal or cellular homeostasis, usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).
CGO:0009415A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water stimulus.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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