Gene omics information

Query gene ID At1g53920
Gene name GLIP5
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g53920841830GLIP5Contains lipase signature motif and GDSL domain.S.X.H.G.
0.2930.3At5g44370834463PHT4Encodes an inorganic phosphate transporter (PHT4;6).S.X.H.G.
0.157.8At2g20370816556MUR3 (MURUS 3)Encodes a xyloglucan galactosyltransferase located in the membrane of Golgi stacks that is involved in the biosynthesis of fucose. It is also involved in endomembrane organization. It is suggested that it is a dual-function protein that is responsible for actin organization and the synthesis of cell wall materials.S.X.H.G.
0.082.3At5g13500831194unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;POS.X.H.G.
0.051.1At5g37480833726unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.010.2At2g34250817986protein transport protein sec61, putativeF:P-P-bond-hydrolysis-driven protein transmembrane transporter activity;P:response to salt stress, protein secretion;C:membrane;BOMAFPS.X.H.G.
Click here to hide the above table.


Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
123.899.9E-MEXP-1443-raw-cel-1581869573
85.999.9E-MEXP-1443-raw-cel-1581869515
65.899.8E-MEXP-1443-raw-cel-1581869803
64.199.8GSM184894Arabidopsis, root cells, columella root cap, standard conditions, replicate 3GSE7641Expression analysis of root cell-types after treatment with salt
57.999.8E-MEXP-1443-raw-cel-1581869745
52.199.8GSM142851MG001_ATH1_A4-Torres-2N1GSE6176Impact of Type III effectors on plant defense responses
45.899.8GSM133126S0_2H_BGSE5688AtGenExpress: Response to sulfate limitation
44.299.8E-MEXP-1443-raw-cel-1581869688
37.699.7GSM133125S0_2H_AGSE5688AtGenExpress: Response to sulfate limitation
32.799.7GSM142833MG001_ATH1_A10-Torres-5N1GSE6176Impact of Type III effectors on plant defense responses
Click here to hide the above table.


Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.029e-342At5g16370831498AAE5 (ACYL ACTIVATING ENZYME 5)F:catalytic activity;P:metabolic process;C:peroxisome;BOMFPAVC.G.S.X.
0.019e-342At3g27480822370DC1 domain-containing proteinF:molecular_function unknown;P:intracellular signaling cascade;C:cellular_component unknown;PMOC.G.S.X.
0.019e-342At3g27473822369DC1 domain-containing proteinF:protein binding, zinc ion binding;P:intracellular signaling cascade;C:unknown;PMOC.G.S.X.
0.019e-342At3g27490822371DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.029e-342At3g27510822373protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.044e-240At5g40990834101GLIP1 (GDSL LIPASE1)Component of plant resistance. Contains lipase signature motif and GDSL domain. Directly interferes with the fungal infection process by acting on fungal cell walls through its action as a antimicrobial compound. Critical component for both local and systemic resistance responses in the incompatible interaction with Alternaria brassicicola in the ethylene-dependent pathway.C.G.S.X.
0.031e-138At5g14450831296GDSL-motif lipase/hydrolase family proteinF:hydrolase activity, acting on ester bonds, carboxylesterase activity;P:lipid metabolic process;C:plant-type cell wall;PBFOMC.G.S.X.
0.011e-138At5g25900832659GA3 (GA REQUIRING 3)Encodes a member of the CYP701A cytochrome p450 family that is involved in later steps of the gibberellin biosynthetic pathway.C.G.S.X.
0.021e-138At5g16340831495AMP-binding protein, putativeF:catalytic activity;P:metabolic process;C:unknown;BOMFPAVC.G.S.X.
Click here to hide the above table.



Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.063e-344Glycine maxGma.6802.1.A1_atBU545084--1e-3At1g53920GLIP5C.G.S.X.
0.023e-136Hordeum vulgareContig22642_atContig22642--4e+0At2g04400indole-3-glycerol phosphate synthase (IGPS)C.G.S.X.
0.022e-242Oryza sativaOs01g0973500AK069546.1-Protein kinase APK1A (EC 2.7.1.-)7e-48At1g07570APK1AC.G.S.X.
0.038e-136Populus trichocarpaPtpAffx.42086.1.A1_atDN486270--2e+0At1g36078unknown proteinC.G.S.X.
0.022e-138Triticum aestivumTaAffx.24050.1.S1_atCA725554--3e+0At5g24165unknown proteinC.G.S.X.
0.023e+032Vitis vinifera1622746_atCA814164--1e+1Atcg00810-C.G.S.X.
0.024e+032Zea maysZm.19299.1.A1_atBM074654--4e-3At4g09270unknown proteinC.G.S.X.
Click here to hide the above table.


Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
LGO:0006629The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
Click here to hide the above table.


Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
Click here to hide the above table.



Back to the CoP portal site

Back to the KAGIANA project homepage