CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g52890

Gene name ANAC019 (Arabidopsis NAC domain containing protein 19)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At1g52890 841722 ANAC019 (Arabidopsis NAC domain containing protein 19) encodes a NAC transcription factor whose expression is induced by drought, high salt, and abscisic acid. This gene binds to ERD1 promoter in vitro. S.X. H.G.
0.60 75.7 At4g37990 829955 ELI3-2 (ELICITOR-ACTIVATED GENE 3-2) Encodes an aromatic alcohol:NADP+ oxidoreductase whose mRNA levels are increased in response to treatment with a variety of phytopathogenic bacteria. Though similar to mannitol dehydrogenases, this enzyme does not have mannitol dehydrogenase activity. S.X. H.G.
0.44 57.2 At3g46660 823819 UGT76E12 (UDP-GLUCOSYL TRANSFERASE 76E12) F:quercetin 3-O-glucosyltransferase activity, quercetin 7-O-glucosyltransferase activity, UDP-glycosyltransferase activity, transferase activity, transferring glycosyl groups;P:metabolic process;C:cellular_component unknown;PMBVOF S.X. H.G.
0.40 50.8 At2g45570 819165 CYP76C2 member of CYP76C S.X. H.G.
0.36 43.6 At2g29470 817496 ATGSTU3 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 3) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
81.9 99.9 GSM152143 siz1-3 drought 2 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
75.0 99.9 GSM152145 siz1-3 drought 3 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
67.3 99.8 GSM152135 Col-0 drought 1 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
65.6 99.8 E-MEXP-1443-raw-cel-1581869921
64.4 99.8 GSM152141 siz1-3 drought 1 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
62.6 99.8 GSM152137 Col-0 drought 2 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
59.8 99.8 GSM128677 Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
59.7 99.8 GSM142846 MG001_ATH1_A27-Torres-9N1 GSE6176 Impact of Type III effectors on plant defense responses
57.4 99.8 E-MEXP-546-raw-cel-863289532
56.5 99.8 GSM152139 Col-0 drought 3 GSE6583 Genome-wide transcriptome analysis of Arabidopsis and siz1-3 response to drought stress
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.50 2e-132 472 At3g15500 820789 ANAC055 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 55) Encodes an ATAF-like NAC-domain transcription factor that doesn't contain C-terminal sequences shared by CUC1, CUC2 and NAM. Note: this protein (AtNAC3) is not to be confused with the protein encoded by locus AT3G29035, which, on occasion, has also been referred to as AtNAC3. C.G. S.X.
0.19 2e-12 73 At3g04070 819562 anac047 (Arabidopsis NAC domain containing protein 47) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:cellular_component unknown;P C.G. S.X.
0.10 1e-10 67 At2g33480 817913 ANAC041 (Arabidopsis NAC domain containing protein 41) F:transcription factor activity;P:multicellular organismal development, regulation of transcription;C:unknown;PMOF C.G. S.X.
0.14 8e-9 61 At5g08790 830779 ATAF2 induced by wounding, belongs to a large family of putative transcriptional activators with NAC domain. C.G. S.X.
0.13 3e-8 59 At5g63790 836499 ANAC102 (ARABIDOPSIS NAC DOMAIN CONTAINING PROTEIN 102) Encodes a member of the NAC family of transcription factors. ANAC102 appears to have a role in mediating response to low oxygen stress (hypoxia) in germinating seedlings. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.22 4e-5 50 Glycine max GmaAffx.93509.1.S1_s_at CF808510 NAC domain protein - 2e-9 At1g52890 ANAC019 (Arabidopsis NAC domain containing protein 19) C.G. S.X.
0.03 9e-1 34 Hordeum vulgare Contig6291_at Contig6291 - - 9e-8 At1g77370 glutaredoxin, putative C.G. S.X.
0.04 2e-1 38 Oryza sativa Os03g0815100 AY596808.1 - OsNAC6 protein 7e-4 At1g01720 ATAF1 C.G. S.X.
0.30 5e-17 89 Populus trichocarpa PtpAffx.4325.1.S1_at CV241094 NAC domain protein, IPR003441 - 1e-26 At1g52890 ANAC019 (Arabidopsis NAC domain containing protein 19) C.G. S.X.
0.03 3e-2 40 Triticum aestivum TaAffx.117376.1.S1_at BQ605728 - - 1e-15 At3g04060 anac046 (Arabidopsis NAC domain containing protein 46) C.G. S.X.
0.14 2e-22 105 Vitis vinifera 1609172_at BQ792053 hypothetical protein LOC100243607 - 3e-12 At4g27410 RD26 (RESPONSIVE TO DESICCATION 26) C.G. S.X.
0.04 8e-1 34 Zea mays Zm.5882.1.A1_at AI637237 - - 2e-1 At1g52880 NAM (NO APICAL MERISTEM) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009414 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a water deprivation stimulus, prolonged deprivation of water.
C GO:0007275 The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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