Gene omics information

Query gene ID At1g52680
Gene name late embryogenesis abundant protein-related / LEA protein-related
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.6478.9At1g52680841700late embryogenesis abundant protein-related / LEA protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
1.00100.0At1g04670839451unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;PAFS.X.H.G.
0.9797.6At2g29790817529-Encodes a Maternally expressed gene (MEG) family protein [pseudogene]S.X.H.G.
0.9797.6At2g28355817383LCR5 (Low-molecular-weight cysteine-rich 5)F:molecular_function unknown;P:defense response;C:endomembrane system;PS.X.H.G.
0.9597.0At5g46940834740invertase/pectin methylesterase inhibitor family proteinF:enzyme inhibitor activity, pectinesterase inhibitor activity, pectinesterase activity;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9597.0At2g33690817934late embryogenesis abundant protein, putative / LEA protein, putativeF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.9396.4At3g12660820446FLA14 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 14 PRECURSOR)fasciclin-like arabinogalactan-protein, family (FLA14)S.X.H.G.
0.9396.4At3g21970821756receptor-like protein kinase-relatedF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PS.X.H.G.
0.9396.4At3g51070824271dehydration-responsive protein-relatedF:unknown;P:biological_process unknown;C:unknown;MOBFPVAS.X.H.G.
0.9396.4At3g53080824474galactose-binding lectin family proteinF:sugar binding, beta-galactosidase activity;P:lactose catabolic process, using glucoside 3-dehydrogenase, carbohydrate metabolic process, lactose catabolic process via UDP-galactose, lactose catabolic process;C:endomembrane system, beta-galactosidase complex;POMBS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
452.2100.0GSM142739DH001_ATH1_A6-TCP2GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
402.0100.0GSM142736DH001_ATH1_A3-TCP1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
233.1100.0GSM142740DH001_ATH1_A7-MPG1GSE6162Transcriptome analysis of Arabidopsis microgametogenesis
202.2100.0GSM106969opr3_OPDA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
159.199.9GSM106913opr3_JA_8 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
148.699.9GSM106973ws_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
147.599.9GSM106916opr3_JA_22 hrs_Rep2GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
138.799.9GSM131592ATGE_36_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
138.199.9GSM131591ATGE_36_AGSE5632AtGenExpress: Developmental series (flowers and pollen)
130.999.9GSM106915opr3_JA_22 hrs_Rep1GSE4733Transcriptional regulators of stamen development in Arabidopsis identified by transcriptional profiling
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.024e-238At4g23310828430receptor-like protein kinase, putativeF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:defense response;C:endomembrane system;MPOBFVAC.G.S.X.
0.014e-238At1g63210842626RNA binding / hydrolase, acting on ester bonds / protein binding / transcription elongation regulatorF:transcription elongation regulator activity, protein binding, hydrolase activity, acting on ester bonds, RNA binding;P:regulation of transcription from RNA polymerase II promoter, nucleobase, nucleoside, nucleotide and nucleic acid metabolic process;C:unknown;BMOFPAC.G.S.X.
0.042e-136At2g36920818266unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PC.G.S.X.
0.036e-134At1g49470841370unknown proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMC.G.S.X.
0.013e+032At5g14820831334pentatricopeptide (PPR) repeat-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POMFBAC.G.S.X.
0.033e+032At5g64680836589unknown proteinF:molecular_function unknown;P:biological_process unknown;C:nucleolus;MOPFC.G.S.X.
0.013e+032At4g38600830017KAK (KAKTUS)encodes a member of HECT ubiquitin protein ligase family that is involved in trichome cell morphogenesis. Mutants in this gene exhibit supernumerary trichome branches and increased DNA content.C.G.S.X.
0.023e+032At4g10490826641oxidoreductase, 2OG-Fe(II) oxygenase family proteinF:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity;P:secondary metabolic process;C:cellular_component unknown;POBFMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.082e-550Glycine maxGma.17794.1.S1_atAI939092--3e-3At5g53820unknown proteinC.G.S.X.
0.055e+030Hordeum vulgarerbaal37j13_s_atrbaal37j13--2e+0At1g72360ethylene-responsive element-binding protein, putativeC.G.S.X.
0.061e+034Oryza sativaOsAffx.9671.1.S1_at---0C.G.S.X.
0.106e-1167Populus trichocarpaPtpAffx.3148.1.S1_atBU878906hypothetical protein-9e-11At1g52680late embryogenesis abundant protein-related / LEA protein-relatedC.G.S.X.
0.041e+130Triticum aestivumTaAffx.7928.1.S1_atCA643720--3e-9At3g25640unknown proteinC.G.S.X.
0.088e-132Vitis vinifera1608715_atCB977234hypothetical protein LOC100258268-4e+0At5g10280ATMYB92 (MYB DOMAIN PROTEIN 92)C.G.S.X.
0.071e+032Zea maysZmAffx.38.1.A1_atAI657470--2e+0At4g04423endo-1,3(4)-beta-glucanaseC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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