Gene omics information

Query gene ID At1g52510
Gene name hydrolase, alpha/beta fold family protein
Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g52510841682hydrolase, alpha/beta fold family proteinF:hydrolase activity, catalytic activity;P:unknown;C:chloroplast, chloroplast envelope;BOPMFAS.X.H.G.
0.7888.6At3g54050824572fructose-1,6-bisphosphatase, putative / D-fructose-1,6-bisphosphate 1-phosphohydrolase, putative / FBPase, putativeF:fructose 1,6-bisphosphate 1-phosphatase activity, phosphoric ester hydrolase activity;P:response to cold, fructose metabolic process;C:apoplast, stromule, chloroplast stroma, chloroplast;BOMPFAS.X.H.G.
0.7586.9At5g19220832042APL1 (ADP GLUCOSE PYROPHOSPHORYLASE LARGE SUBUNIT 1)Encodes the large subunit of ADP-glucose pyrophosphorylase which catalyzes the first, rate limiting step in starch biosynthesis. The large subunit plays a regulatory role whereas the small subunit (ApS) is the catalytic isoform. Four isoforms (ApL1-4) have been identified. ApL1 is the major large subunit isoform present in leaves. Mutational analysis of APS1 suggests that APL1 and APL2 can compensate for loss of APS1 catalytic activity,suggesting both have catalytic as well as regulatory functions.S.X.H.G.
0.7385.5At1g15980838168NDF1 (NDH-DEPENDENT CYCLIC ELECTRON FLOW 1)encodes a novel subunit of the chloroplast NAD(P)H dehydrogenase complex, involved in cyclic electron flow around photosystem I to produce ATP.S.X.H.G.
0.7385.5At1g51110841534plastid-lipid associated protein PAP / fibrillin family proteinF:structural molecule activity;P:tryptophan biosynthetic process;C:chloroplast thylakoid membrane, chloroplast, membrane;PBOS.X.H.G.
0.7184.2At3g63140825489CSP41A (CHLOROPLAST STEM-LOOP BINDING PROTEIN OF 41 KDA)Encodes a protein with ribonuclease activity that is involved in plastid rRNA maturation.S.X.H.G.
0.7184.2At1g65230842830unknown proteinF:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBS.X.H.G.
0.7184.2At5g43750834396unknown proteinF:molecular_function unknown;P:response to oxidative stress;C:chloroplast thylakoid membrane, chloroplast;PS.X.H.G.
0.6680.1At1g18060838386unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;PBOS.X.H.G.
0.6680.1At3g48420824000haloacid dehalogenase-like hydrolase family proteinF:hydrolase activity, catalytic activity;P:metabolic process;C:chloroplast, chloroplast stroma, chloroplast envelope;BOPMFAVS.X.H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
9.199.1GSM7717504h low CO2 + light replicate AGSE3423Carbon fixation (endogenous sugar) and light-dependent gene expression
9.199.1GSM269488mkk2, no-treatment, rep-AGSE10646BTH treated mkk1, mkk2 and mkk1/2 knockout mutant
8.999.0GSM131468AtGen_6-9612_Heatstress(3h)+21hrecovery-Shoots-24.0h_Rep2GSE5628AtGenExpress: Stress Treatments (Heat stress)
8.699.0GSM318332ML_35DAS_1GSE12676Arabidopsis thaliana Ler developmental series
8.599.0GSM318330EL_14DAS_1GSE12676Arabidopsis thaliana Ler developmental series
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Homologous genes

Paralogous genes

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HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.016e-136At2g13840815867PHP domain-containing proteinF:DNA binding, DNA-directed DNA polymerase activity, catalytic activity;P:DNA replication;C:cellular_component unknown;BOAPFC.G.S.X.
0.016e-136At1g66930843011serine/threonine protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
0.016e-136At1g73590843693PIN1 (PIN-FORMED 1)Encodes an auxin efflux carrier involved in shoot and root development. It is involved in the maintenance of embryonic auxin gradients. Loss of function severely affects organ initiation, pin1 mutants are characterised by an inflorescence meristem that does not initiate any flowers, resulting in the formation of a naked inflorescence stem. PIN1 is involved in the determination of leaf shape by actively promoting development of leaf margin serrations. In roots, the protein mainly resides at the basal end of the vascular cells, but weak signals can be detected in the epidermis and the cortex. Expression levels and polarity of this auxin efflux carrier change during primordium development suggesting that cycles of auxin build-up and depletion accompany, and may direct, different stages of primordium development. PIN1 action on plant development does not strictly require function of PGP1 and PGP19 proteins.C.G.S.X.
0.012e+034At5g35370833498ATP binding / carbohydrate binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase/ sugar bindingF:in 7 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.012e+034At5g38490833837DNA bindingF:DNA binding;P:regulation of transcription, DNA-dependent;C:cellular_component unknown;PC.G.S.X.
0.012e+034At5g62600836381transportin-SR-relatedF:protein transporter activity, binding;P:intracellular protein transport, protein import into nucleus, docking;C:nucleus, nuclear pore, cytoplasm;MFPOBC.G.S.X.
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Orthologous genes

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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.201e-48194Glycine maxGma.4553.1.A1_atBU081133--1e-48At1g52510hydrolase, alpha/beta fold family proteinC.G.S.X.
0.118e-1477Hordeum vulgareContig10144_s_atContig10144--1e-13At1g52510hydrolase, alpha/beta fold family proteinC.G.S.X.
0.216e-21103Oryza sativaOs04g0644600AK099966.1-Epoxide hydrolase family protein4e-21At1g52510hydrolase, alpha/beta fold family proteinC.G.S.X.
0.234e-1893Populus trichocarpaPtpAffx.112731.1.A1_atCV239317--2e-18At1g52510hydrolase, alpha/beta fold family proteinC.G.S.X.
0.032e+034Triticum aestivumTaAffx.4478.1.S1_atCA739796--5e-1At3g26690ATNUDX13 (ARABIDOPSIS THALIANA NUDIX HYDROLASE HOMOLOG 13)C.G.S.X.
0.113e-961Vitis vinifera1616407_atCD715829hypothetical protein LOC100250971-7e-9At1g52510hydrolase, alpha/beta fold family proteinC.G.S.X.
0.024e+032Zea maysZmAffx.354.1.A1_atAI670541--8e-1At4g28485unknown proteinC.G.S.X.
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Biological processes

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ECCGO IDProcess Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

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