Gene omics information

Query gene ID At1g52070
Gene name jacalin lectin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At1g52070841636jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOBS.X.H.G.
0.9496.7At3g16440820892ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B)myrosinase-binding protein-like protein (AtMLP-300B) mRNA,S.X.H.G.
0.9296.0At2g32610817821ATCSLB01encodes a gene similar to cellulose synthaseS.X.H.G.
0.9296.0At3g47400823894pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBOFVMAS.X.H.G.
0.9195.6At1g06090837118fatty acid desaturase family proteinF:oxidoreductase activity;P:lipid metabolic process;C:cellular_component unknown;BOMFPVS.X.H.G.
0.9195.6At5g58784835994dehydrodolichyl diphosphate synthaseF:dehydrodolichyl diphosphate synthase activity;P:dolichol biosynthetic process;C:endomembrane system;OBAFMPS.X.H.G.
0.8994.6At2g32620817822ATCSLB02encodes a gene similar to cellulose synthaseS.X.H.G.
0.8994.6At5g24070832472peroxidase family proteinF:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOMS.X.H.G.
0.8894.0At1g47600841169BGLU34 (BETA GLUCOSIDASE 34)Encodes a putative myrosinase. Over-expression led to a glucosinolate profile change.S.X.H.G.
0.8894.0At2g37700818347catalytic/ iron ion binding / oxidoreductaseF:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOMPFVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
438.8100.0GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
360.6100.0GSM184483Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
278.1100.0GSM184484Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
244.4100.0GSM133968Birnbaum_1-19_LRC-1_Rep1_ATH1GSE5749A gene expression map of the Arabidopsis root
229.5100.0GSM133969Birnbaum_1-20_LRC-2_Rep2_ATH1GSE5749A gene expression map of the Arabidopsis root
145.199.9GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
142.499.9GSM184478Lateral Root Cap root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
116.399.9GSM265414Arabidopsis, root cells, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
95.599.9GSM184479Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
89.299.9GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.851e-155549At1g52060841635-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOBC.G.S.X.
0.668e-46184At1g52050841634jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOC.G.S.X.
0.203e-24113At2g25980817139jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBOC.G.S.X.
0.148e-1271At5g35950833586jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
0.143e-1169At5g28520832945-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.153e-1169At1g57570842133jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.175e-1065At5g38550833843jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBC.G.S.X.
0.242e-963At1g33790840271jacalin lectin family proteinF:unknown;P:biological_process unknown;C:chloroplast;POC.G.S.X.
0.148e-961At5g35940833584jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.031e+132Glycine maxGmaAffx.89191.1.A1_atCK606438--1e-20At3g0852060S ribosomal protein L41 (RPL41D)C.G.S.X.
0.024e+032Hordeum vulgareEBes01_SQ004_M23_atEBes01_SQ004_M23--6e-2At1g68300universal stress protein (USP) family proteinC.G.S.X.
0.029e-136Oryza sativaOs09g0570300AK058687.1-Short-chain dehydrogenase Tic322e-4At4g11410short-chain dehydrogenase/reductase (SDR) family proteinC.G.S.X.
0.032e-138Populus trichocarpaPtpAffx.2581.1.S1_atDN501863hypothetical protein-2e-5At4g29250transferase family proteinC.G.S.X.
0.035e-136Triticum aestivumTaAffx.53982.1.S1_atCA687155--2e-1At5g47080CKB1C.G.S.X.
0.026e-134Vitis vinifera1621184_atCD009048--3e+1At3g02555unknown proteinC.G.S.X.
0.023e+032Zea maysZm.6484.2.S1_atBM074510ubiquitin-conjugating enzyme E2 7-2e-37At3g46460UBC13 (ubiquitin-conjugating enzyme 13)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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