Gene omics information

Query gene ID At1g52050
Gene name jacalin lectin family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.8491.9At1g52050841634jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOS.X.H.G.
0.9597.0At2g32610817821ATCSLB01encodes a gene similar to cellulose synthaseS.X.H.G.
0.9496.7At3g47400823894pectinesterase family proteinF:enzyme inhibitor activity, pectinesterase activity;P:cell wall modification;C:endomembrane system, cell wall, plant-type cell wall;PBOFVMAS.X.H.G.
0.9396.4At1g06090837118fatty acid desaturase family proteinF:oxidoreductase activity;P:lipid metabolic process;C:cellular_component unknown;BOMFPVS.X.H.G.
0.9396.4At5g58784835994dehydrodolichyl diphosphate synthaseF:dehydrodolichyl diphosphate synthase activity;P:dolichol biosynthetic process;C:endomembrane system;OBAFMPS.X.H.G.
0.9195.6At2g32620817822ATCSLB02encodes a gene similar to cellulose synthaseS.X.H.G.
0.9195.6At3g16440820892ATMLP-300B (MYROSINASE-BINDING PROTEIN-LIKE PROTEIN-300B)myrosinase-binding protein-like protein (AtMLP-300B) mRNA,S.X.H.G.
0.9195.6At1g47600841169BGLU34 (BETA GLUCOSIDASE 34)Encodes a putative myrosinase. Over-expression led to a glucosinolate profile change.S.X.H.G.
0.8994.6At2g37700818347catalytic/ iron ion binding / oxidoreductaseF:oxidoreductase activity, iron ion binding, catalytic activity;P:oxidation reduction, fatty acid biosynthetic process;C:endoplasmic reticulum;BOMPFVS.X.H.G.
0.8994.6At3g20160821560geranylgeranyl pyrophosphate synthase, putative / GGPP synthetase, putative / farnesyltranstransferase, putativeF:farnesyltranstransferase activity;P:isoprenoid biosynthetic process;C:unknown;OBFPMAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
682.6100.0GSM184483Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
651.0100.0GSM184480Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
374.7100.0GSM184484Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
258.9100.0GSM184478Lateral Root Cap root cells 2hr KCl control treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
243.4100.0GSM184477Lateral Root Cap root cells 2hr KCl control treated, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
208.7100.0GSM184481Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3GSE7631Cell-specific nitrogen responses in the Arabidopsis root
184.6100.0GSM265414Arabidopsis, root cells, -Fe, replicate 1GSE10496Expression analysis of the effect of protoplasting and FACS sorting in roots exposed to iron deficiency (-Fe)
163.699.9GSM184479Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
128.699.9GSM184482Lateral Root Cap root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
105.199.9GSM184500Endodermis&Pericycle root cells 2hr continuous KNO3 treated, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.668e-46184At1g52070841636jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOBC.G.S.X.
0.651e-26121At1g52060841635-F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;PMOBC.G.S.X.
0.173e-1169At1g57570842133jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.122e-963At5g35940833584jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POBMC.G.S.X.
0.093e-859At5g49860835049jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.071e-757At1g60110842306-F:unknown;P:unknown;C:unknown;POC.G.S.X.
0.141e-757At1g60130842308jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.145e-756At1g52130841643jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;POC.G.S.X.
0.132e-654At5g35950833586jacalin lectin family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.023e+034Glycine maxGmaAffx.85030.1.S1_atAW707152--4e+0At5g61280remorin family proteinC.G.S.X.
0.034e+032Hordeum vulgareContig3246_s_atContig3246--3e-4At2g2771060S acidic ribosomal protein P2 (RPP2B)C.G.S.X.
0.034e+034Oryza sativaOsAffx.7370.1.S1_at---0C.G.S.X.
0.023e+034Populus trichocarpaPtpAffx.572.3.S1_atBU870896AP2 domain-containing transcription factor-2e-18At1g13260RAV1C.G.S.X.
0.035e-136Triticum aestivumTaAffx.10653.1.S1_atCA605889--4e+0At1g29490auxin-responsive family proteinC.G.S.X.
0.042e+032Vitis vinifera1611946_s_atCF373318hypothetical protein LOC100260940-1e-1At5g04220SYTCC.G.S.X.
0.028e-134Zea maysZm.8547.1.A1_atBM338859--5e+0At3g09380-C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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