Gene omics information

Query gene ID At1g51900
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5673.0At1g51900841617unknown proteinF:molecular_function unknown;P:biological_process unknown;C:mitochondrion;OMBFPVAS.X.H.G.
0.7586.9At3g58390825008eukaryotic release factor 1 family protein / eRF1 family proteinF:translation release factor activity;P:translational termination, translation;C:nucleus;OAMFPVS.X.H.G.
0.6781.6At1g65630842874DegP3 (DegP protease 3)Encodes a putative DegP protease.S.X.H.G.
0.6176.7At4g21240827873F-box family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5773.8At1g33870840284avirulence-responsive protein, putative / avirulence induced gene protein, putative / AIG protein, putativeF:GTP binding;P:response to bacterium;C:cellular_component unknown;MPOBS.X.H.G.
0.5368.6At1g26350839177unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.5065.3At5g37910833770seven in absentia (SINA) family proteinF:ubiquitin-protein ligase activity, protein binding, zinc ion binding;P:multicellular organismal development, ubiquitin-dependent protein catabolic process, protein ubiquitination;C:nucleus;MPOFS.X.H.G.
0.4050.8At2g28170817363ATCHX7member of Putative Na+/H+ antiporter familyS.X.H.G.
0.3948.4At5g58890836006AGL82 (AGAMOUS-LIKE 82)F:transcription factor activity, DNA binding;P:regulation of transcription, DNA-dependent;C:nucleus;PMFOS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
276.3100.0GSM143301Ts_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
272.8100.0GSM253652Ler 2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
272.3100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
253.0100.0GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
246.3100.0GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
245.1100.0GSM253649Col-0-2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
240.8100.0GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
238.9100.0GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
236.8100.0GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
235.9100.0GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.028e-550At2g14830815971unknown proteinF:unknown;P:biological_process unknown;C:cellular_component unknown;MPOFBVC.G.S.X.
0.015e-344At1g24120839024ARL1 (ARG1-LIKE 1)encodes a DnaJ-like protein similar to ARG1 and ARL2 that are both involved in root and hypocotyl gravitropism response. However, null mutation in this gene does not result in defects in gravitropism. Gene is expressed in all tissues examined.C.G.S.X.
0.012e-242At5g45770834616AtRLP55 (Receptor Like Protein 55)F:protein binding;P:unknown;C:unknown;PMBOFAVC.G.S.X.
0.012e-242At1g18400838421BEE1 (BR Enhanced Expression 1)F:transcription factor activity;P:regulation of transcription;C:nucleus;PFMOC.G.S.X.
0.017e-240At5g28300832914trihelix DNA-binding protein, putativeF:transcription factor activity;P:regulation of transcription;C:chloroplast;OMPFBVAC.G.S.X.
0.017e-240At5g61150836236VIP4 (VERNALIZATION INDEPENDENCE 4)Encodes highly hydrophilic protein involved in positively regulating FLC expression. Mutants are early flowering and show a loss of FLC expression in the absence of cold.C.G.S.X.
0.027e-240At5g67490836885unknown proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;MOBPFC.G.S.X.
0.017e-240At5g46030834644unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFPVBAC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.014e-138Glycine maxPsAffx.CL1849Contig1_atPsAffx.CL1849Contig1--3e-1At3g49770unknown proteinC.G.S.X.
0.026e-136Hordeum vulgareHVSMEf0015J15r2_atHVSMEf0015J15r2--4e-1At4g31355unknown proteinC.G.S.X.
0.031e-140Oryza sativaOs02g05067009630.m02902--3e-2At5g43185Expressed proteinC.G.S.X.
0.021e-140Populus trichocarpaPtpAffx.216388.1.S1_x_atpmrna31140hypothetical protein-2e+0At4g20420tapetum-specific protein-relatedC.G.S.X.
0.023e-138Triticum aestivumTaAffx.115792.1.S1_atCA615969--2e-1At3g02870VTC4C.G.S.X.
0.029e-238Vitis vinifera1621110_atCF212872hypothetical protein LOC100268077-1e-10At3g24506unknown proteinC.G.S.X.
0.012e+034Zea maysZm.9299.1.A1_atBM350867hypothetical protein LOC100192677-2e+0At4g31860protein phosphatase 2C, putative / PP2C, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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