CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g51890

Gene name leucine-rich repeat protein kinase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.55 70.6 At1g51890 841616 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.75 86.9 At1g26420 839184 FAD-binding domain-containing protein F:electron carrier activity, oxidoreductase activity, FAD binding, catalytic activity;P:unknown;C:endomembrane system;FBPOA S.X. H.G.
0.57 73.8 At4g23210 828420 protein kinase family protein Encodes a Cysteine-rich receptor-like kinase (CRK13). Overexpression of CRK13 leads to hypersensitive response cell death, and induces defense against pathogens by causing increased accumulation of salicylic acid. S.X. H.G.
0.46 59.8 At2g19190 816436 FRK1 (FLG22-INDUCED RECEPTOR-LIKE KINASE 1) Receptor-like protein kinase. Involved in early defense signaling. S.X. H.G.
0.40 50.8 At5g25250 832596 - F:molecular_function unknown;P:biological_process unknown;C:plasma membrane, vacuole;BOMFPAV S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
99.7 99.9 GSM142839 MG001_ATH1_A18-Torres-6N6 GSE6176 Impact of Type III effectors on plant defense responses
92.8 99.9 GSM142853 MG001_ATH1_A6-Torres-2N6 GSE6176 Impact of Type III effectors on plant defense responses
92.3 99.9 GSM142829 GM001_ATH1_A11-Torres-5N3 GSE6176 Impact of Type III effectors on plant defense responses
87.8 99.9 GSM131139 AtGen_B-25_2-4-4_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
82.6 99.9 GSM128672 Underwood_1-27_hrpA-10e8-7h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
77.1 99.9 GSM142852 MG001_ATH1_A5-Torres-2N3 GSE6176 Impact of Type III effectors on plant defense responses
77.0 99.9 GSM142838 MG001_ATH1_A17-Torres-6N3 GSE6176 Impact of Type III effectors on plant defense responses
68.0 99.9 GSM131112 AtGen_B-40_3-5-4_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
64.5 99.8 E-MEXP-1094-raw-cel-1379507273
63.7 99.8 GSM142837 MG001_ATH1_A16-Torres-6N1 GSE6176 Impact of Type III effectors on plant defense responses
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.57 3e-128 460 At1g51860 841613 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.63 6e-126 452 At1g51880 841615 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.53 1e-111 404 At1g51870 841614 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.51 2e-76 287 At1g51910 841618 protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.16 1e-34 149 At3g21340 821688 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.07 7e-24 113 At2g19210 816438 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.16 7e-21 103 At2g04300 814968 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.13 7e-21 103 At1g51805 841607 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.09 1e-19 99 At5g16900 831553 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.10 3e-2 42 Glycine max GmaAffx.65419.2.S1_at BU762206 - - 4e-3 At1g51890 leucine-rich repeat protein kinase, putative C.G. S.X.
0.02 1e-5 52 Hordeum vulgare Contig11886_s_at Contig11886 - - 1e-4 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
0.02 3e-9 65 Oryza sativa Os04g0366400 9632.m02815 - - 4e-6 At1g21245 wall-associated kinase-related C.G. S.X.
0.03 8e-6 54 Populus trichocarpa PtpAffx.102491.1.A1_at CK097195 hypothetical protein - 3e-17 At1g75820 CLV1 (CLAVATA 1) C.G. S.X.
0.03 1e-3 46 Triticum aestivum Ta.7448.1.A1_at BJ320729 - - 1e-3 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
0.02 1e-1 38 Vitis vinifera 1619555_at AY395743.1 hypothetical protein LOC100250154 - 3e-61 At5g02800 protein kinase family protein C.G. S.X.
0.02 9e-3 42 Zea mays Zm.721.1.A1_at BM267834 Salt-inducible putative protein serine/threonine/tyrosine kinase - 1e-33 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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