CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g51880

Gene name leucine-rich repeat protein kinase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.95 97.0 At1g51880 841615 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.63 78.1 At4g05270 825875 ubiquitin family protein F:molecular_function unknown;P:protein modification process;C:cellular_component unknown;POMF S.X. H.G.
0.62 77.3 At1g18290 838409 unknown protein F:molecular_function unknown;P:N-terminal protein myristoylation;C:chloroplast;P S.X. H.G.
0.61 76.7 At1g03320 839528 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVA S.X. H.G.
0.61 76.7 At5g39370 833933 S-locus glycoprotein, putative F:sugar binding;P:biological_process unknown;C:unknown;P S.X. H.G.
0.59 74.7 At2g46915 819305 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;PBOM S.X. H.G.
0.58 73.8 At1g48220 841242 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.56 73.0 At3g59170 825086 F-box family protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P S.X. H.G.
0.52 67.4 At5g06920 830583 FLA21 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 21 PRECURSOR) F:molecular_function unknown;P:unknown;C:unknown;P S.X. H.G.
0.51 66.3 At5g49050 834964 - F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
739.8 100.0 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
260.3 100.0 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
197.8 100.0 GSM143308 Tsu_genomic_hyb_3 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
173.2 100.0 GSM253652 Ler 2 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
161.7 99.9 GSM143310 Tsu_genomic_hyb_1 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
148.4 99.9 GSM253651 Ler 1 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
144.0 99.9 GSM143307 Low_Na_seg_pool_tsu_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
130.9 99.9 GSM253650 Ler 3 GSE10039 Low_Mo_Arabidopsis_mapping_MOT1
125.8 99.9 GSM143298 Low_Na_seg_pool_ts_col_F2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
124.9 99.9 GSM143309 Tsu_genomic_hyb_2 GSE6203 Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.68 0 1324 At1g51860 841613 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.65 0 1237 At1g51870 841614 protein kinase family protein F:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.50 5e-145 515 At1g51910 841618 protein kinase family protein F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.63 6e-126 452 At1g51890 841616 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.09 2e-24 115 At1g51820 841609 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.09 7e-24 113 At1g51805 841607 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.12 1e-22 109 At1g51830 841610 ATP binding / kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA C.G. S.X.
0.16 4e-22 107 At3g21340 821688 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.16 3e-20 101 At2g04300 814968 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.05 3e-5 52 Glycine max GmaAffx.4452.2.S1_at BM188434 stress-induced receptor-like kinase 2 - 5e-6 At1g51880 leucine-rich repeat protein kinase, putative C.G. S.X.
0.02 4e-2 40 Hordeum vulgare Contig11886_s_at Contig11886 - - 1e-4 At1g06700 serine/threonine protein kinase, putative C.G. S.X.
0.03 3e-3 46 Oryza sativa Os01g0810900 NM_191040.1 - Protein kinase domain containing protein 1e-3 At1g51880 leucine-rich repeat protein kinase, putative C.G. S.X.
0.06 3e-2 42 Populus trichocarpa PtpAffx.59464.1.A1_at AJ780287 hypothetical protein - 6e-3 At1g51880 leucine-rich repeat protein kinase, putative C.G. S.X.
0.02 4e-4 48 Triticum aestivum Ta.11795.1.S1_at BQ170818 - - 7e-3 At5g54590 protein kinase family protein C.G. S.X.
0.02 6e-3 42 Vitis vinifera 1616189_at CF511570 hypothetical protein LOC100260741 - 6e-18 At1g75820 CLV1 (CLAVATA 1) C.G. S.X.
0.02 6e-1 36 Zea mays Zm.5300.1.A1_at AI734564 - - 5e-9 At5g01020 protein kinase family protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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