CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g51830

Gene name ATP binding / kinase/ protein serine/threonine kinase

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.61 76.7 At1g51830 841610 ATP binding / kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA S.X. H.G.
0.74 86.1 At5g22890 832353 zinc finger (C2H2 type) family protein F:transcription factor activity;P:response to chitin, regulation of transcription;C:intracellular;MOPF S.X. H.G.
0.65 79.6 At4g25090 828612 respiratory burst oxidase, putative / NADPH oxidase, putative F:in 7 functions;P:oxidation reduction;C:cytosolic ribosome, vacuole;MFPBOA S.X. H.G.
0.57 73.8 At2g44010 819006 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.57 73.8 At5g65210 836646 TGA1 F:transcription factor activity, calmodulin binding, DNA binding;P:defense response to bacterium;C:nucleus;POM S.X. H.G.
0.57 73.8 At1g78000 844135 SULTR1 Encodes a sulfate transporter that can restore sulfate uptake capacity of a yeast mutant lacking sulfate transporter genes. S.X. H.G.
0.57 73.8 At3g62040 825377 catalytic/ hydrolase F:hydrolase activity, catalytic activity;P:metabolic process;C:unknown;OBPFA S.X. H.G.
0.57 73.8 At1g31060 839992 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PM S.X. H.G.
0.56 73.0 At2g30840 817635 2-oxoglutarate-dependent dioxygenase, putative encodes a protein whose sequence is similar to 2-oxoglutarate-dependent dioxygenase S.X. H.G.
0.54 69.5 At2g23030 816833 SNRK2.9 (SNF1-RELATED PROTEIN KINASE 2.9) encodes a member of SNF1-related protein kinases (SnRK2) S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
98.9 99.9 GSM184481 Lateral Root Cap root cells 2hr transitory KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
55.7 99.8 GSM184477 Lateral Root Cap root cells 2hr KCl control treated, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
52.9 99.8 GSM131426 AtGen_6-8325_Woundingstress-Roots-3.0h_Rep2 GSE5627 AtGenExpress: Stress Treatments (Wounding stress)
51.4 99.8 GSM131402 AtGen_6-7422_UV-Bstress-Roots-6.0h_Rep2 GSE5626 AtGenExpress: Stress Treatments (UV-B stress)
50.3 99.8 GSM131425 AtGen_6-8324_Woundingstress-Roots-3.0h_Rep1 GSE5627 AtGenExpress: Stress Treatments (Wounding stress)
49.5 99.8 GSM131430 AtGen_6-8424_Woundingstress-Roots-6.0h_Rep2 GSE5627 AtGenExpress: Stress Treatments (Wounding stress)
47.6 99.8 GSM131453 AtGen_6-9321_Heatstress-Roots-3.0h_Rep1 GSE5628 AtGenExpress: Stress Treatments (Heat stress)
46.5 99.8 GSM131349 AtGen_6-4421_Droughtstress-Roots-6.0h_Rep1 GSE5624 AtGenExpress: Stress Treatments (Drought stress)
43.4 99.8 GSM131262 AtGen_6-1122_Cold(4°C)-Roots-0.5h_Rep2 GSE5621 AtGenExpress: Stress Treatments (Cold stress)
43.1 99.8 GSM131381 AtGen_6-5621_Genotoxicstress-Roots-24.0h_Rep1 GSE5625 AtGenExpress: Stress Treatments (Genotoxic stress)
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.75 0 1745 At1g51820 841609 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.73 0 991 At1g51850 841612 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.62 0 989 At1g51805 841607 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.46 3e-146 519 At1g51810 841608 ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase F:protein binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;PMOBFVA C.G. S.X.
0.44 7e-116 418 At3g21340 821688 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.42 3e-81 303 At2g04300 814968 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.19 4e-40 167 At2g29000 817449 leucine-rich repeat family protein / protein kinase family protein F:protein binding, protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.21 4e-37 157 At2g28960 817445 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.30 2e-36 155 At1g49100 841333 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 4e-1 38 Glycine max Gma.4062.1.S1_at BI969642 - - 2e-10 At5g02290 NAK C.G. S.X.
0.02 1e-1 38 Hordeum vulgare Contig15403_at Contig15403 - - 6e-7 At3g13065 SRF4 (STRUBBELIG-RECEPTOR FAMILY 4) C.G. S.X.
0.03 3e-2 42 Oryza sativa Os10g0326200 NM_195709.1 - - 1e-5 At1g70110 lectin protein kinase family protein C.G. S.X.
0.02 1e-4 50 Populus trichocarpa PtpAffx.203599.1.S1_x_at pmrna7142 hypothetical protein - 7e-12 At1g69730 protein kinase family protein C.G. S.X.
0.02 1e-3 46 Triticum aestivum Ta.4434.2.S1_at BJ260626 - - 2e-7 At5g63930 leucine-rich repeat transmembrane protein kinase, putative C.G. S.X.
0.05 5e-3 42 Vitis vinifera 1615495_at CB978751 hypothetical protein LOC100246196 - 2e-5 At5g35580 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
0.01 1e-1 38 Zea mays Zm.13801.1.S1_at AY104850.1 - - 4e+0 At5g40730 AGP24 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
C GO:0006468 The process of introducing a phosphate group on to a protein.
C GO:0007169 The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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