CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g51820

Gene name leucine-rich repeat protein kinase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.75 86.9 At1g51820 841609 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
0.93 96.4 At5g66620 836794 DAR6 (DA1-RELATED PROTEIN 6) F:zinc ion binding;P:unknown;C:unknown;MOBFPVA S.X. H.G.
0.91 95.6 At4g37770 829933 ACS8 Encodes an auxin inducible ACC synthase. S.X. H.G.
0.90 95.1 At1g30135 839893 JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.89 94.6 At1g51620 841587 protein kinase family protein F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.87 93.5 At4g26200 828726 ACS7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. S.X. H.G.
0.86 93.1 At2g34600 818025 JAZ7 (JASMONATE-ZIM-DOMAIN PROTEIN 7) F:molecular_function unknown;P:response to jasmonic acid stimulus, response to chitin;C:cellular_component unknown;P S.X. H.G.
0.86 93.1 At2g20350 816554 AP2 domain-containing transcription factor, putative encodes a member of the ERF (ethylene response factor) subfamily B-6 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 12 members in this subfamily including RAP2.11. S.X. H.G.
0.86 93.1 At1g33760 840267 AP2 domain-containing transcription factor, putative encodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY. S.X. H.G.
0.86 93.1 At4g38420 829999 sks9 (SKU5 Similar 9) F:oxidoreductase activity, copper ion binding;P:unknown;C:plant-type cell wall;FBPMOA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
695.7 100.0 E-MEXP-807-raw-cel-1173273223
434.9 100.0 E-MEXP-807-raw-cel-1173272948
305.7 100.0 E-MEXP-807-raw-cel-1173273060
155.7 99.9 E-MEXP-807-raw-cel-1173273088
151.4 99.9 E-MEXP-807-raw-cel-1173273116
141.2 99.9 GSM131148 AtGen_B-34_3-6-1_REP3_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
122.8 99.9 E-MEXP-807-raw-cel-1173273170
120.1 99.9 GSM131134 AtGen_B-20_2-6-1_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
101.2 99.9 GSM142851 MG001_ATH1_A4-Torres-2N1 GSE6176 Impact of Type III effectors on plant defense responses
93.9 99.9 GSM131132 AtGen_B-18_2-4-1_REP2_ATH1 GSE5615 AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.89 0 2734 At1g51850 841612 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:plasma membrane;PMOBFVA C.G. S.X.
0.75 0 1745 At1g51830 841610 ATP binding / kinase/ protein serine/threonine kinase F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA C.G. S.X.
0.77 0 1223 At1g51805 841607 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.42 1e-167 591 At1g51810 841608 ATP binding / kinase/ protein binding / protein kinase/ protein serine/threonine kinase F:protein binding, protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:unknown;PMOBFVA C.G. S.X.
0.43 2e-156 553 At3g21340 821688 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.29 1e-90 335 At1g51840 841611 protein kinase-related F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.41 2e-88 327 At2g04300 814968 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.23 2e-55 218 At2g28960 817445 leucine-rich repeat protein kinase, putative F:in 6 functions;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.32 2e-52 208 At1g49100 841333 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.02 8e-6 54 Glycine max GmaAffx.92982.1.S1_at CF808707 - - 6e-6 At3g51990 protein kinase family protein C.G. S.X.
0.01 2e-7 57 Hordeum vulgare Contig11532_at Contig11532 - - 1e-22 At2g42960 protein kinase family protein C.G. S.X.
0.02 2e-4 50 Oryza sativa Os.53728.1.S1_at - - - 0 C.G. S.X.
0.02 1e-4 50 Populus trichocarpa PtpAffx.207725.1.S1_at pmrna15350 hypothetical protein - 7e-6 At5g02070 protein kinase-related C.G. S.X.
0.02 2e-5 52 Triticum aestivum Ta.11367.2.S1_at BJ207672 - - 6e-14 At2g42960 protein kinase family protein C.G. S.X.
0.02 3e-5 50 Vitis vinifera 1615495_at CB978751 hypothetical protein LOC100246196 - 2e-5 At5g35580 ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase C.G. S.X.
0.01 6e-1 36 Zea mays Zm.16785.2.A1_at AI657406 ubiquitin-conjugating enzyme protein E2 - 6e-1 At5g46860 VAM3 C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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