CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g51760

Gene name IAR3 (IAA-ALANINE RESISTANT 3)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.40 50.8 At1g51760 841602 IAR3 (IAA-ALANINE RESISTANT 3) encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and conjugates IAA-Ala in vitro. Gene is expressed most strongly in roots, stems, and flowers. S.X. H.G.
0.44 57.2 At2g24850 817022 TAT3 (TYROSINE AMINOTRANSFERASE 3) Encodes a tyrosine aminotransferase that is responsive to treatment with jasmonic acid. S.X. H.G.
0.33 38.1 At5g13220 831162 JAZ10 (JASMONATE-ZIM-DOMAIN PROTEIN 10) Plants overexpressing At5g13220.3, but not At5g13220.1 showed enhanced insensitivity to MeJa. S.X. H.G.
0.19 12.7 At2g29460 817495 ATGSTU4 (ARABIDOPSIS THALIANA GLUTATHIONE S-TRANSFERASE TAU 4) Encodes glutathione transferase belonging to the tau class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
0.12 4.9 At3g51450 824308 strictosidine synthase family protein F:strictosidine synthase activity;P:alkaloid biosynthetic process, biosynthetic process;C:endomembrane system;BPMOAF S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
125.1 99.9 E-ATMX-13-raw-cel-1556149759
124.7 99.9 GSM128676 Underwood_1-29_DC3000-10e8-7h_Rep2_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
108.0 99.9 E-ATMX-13-raw-cel-1556149871
100.1 99.9 GSM272991 flu over-tAPX 14-2, biological rep1 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
100.0 99.9 GSM272992 flu over-tAPX 14-2, biological rep2 GSE10812 Expression data from thylakoidal ascorbate peroxidase overexpressor Arabidopsis thaliana (Col) rosette leaves
83.8 99.9 GSM133029 BC482-1 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
78.1 99.9 E-MEXP-546-raw-cel-863289532
67.6 99.9 GSM133030 BC482-2 GSE5684 AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
64.2 99.8 GSM128677 Underwood_1-30_DC3000-10e8-7h_Rep3_ATH1 GSE5520 Genome-wide transcriptional analysis of the compatible A. thaliana-P. syringae pv. tomato DC3000 interaction
62.8 99.8 E-MEXP-546-raw-cel-863289424
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.86 0 1297 At1g51780 841604 ILL5 encodes a member of the six Arabidopsis IAA-amino acid conjugate hydrolase subfamily and conjugates and is very similar to IAR3. C.G. S.X.
0.04 2e-4 48 At5g56660 835767 ILL2 encodes IAA-amino acid hydrolase that has a broad range of substrate specificity. It is most active on IAA-Ala among the IAA-conjugate hydrolases tested. C.G. S.X.
0.04 3e-3 44 At5g56650 835766 ILL1 encodes a protein similar to IAA conjugate hydrolases. Enzyme assays with purified GST-tagged protein shows some activity in vitro but too low to be physiologically significant. C.G. S.X.
0.01 2e-1 38 At5g66670 836799 unknown protein F:molecular_function unknown;P:biological_process unknown;C:chloroplast;POB C.G. S.X.
0.01 7e-1 36 At1g04050 839320 SUVR1 (ARABIDOPSIS HOMOLOG OF SU(VAR)3-9 1) Encodes SUVR1, one of the four closely related Arabidopsis SUVR proteins that belong to the SU(VAR)3-9 subgroup of SET-domain proteins. Proteins containing the evolutionarily conserved SET domain are involved in regulation of eukaryotic gene expression and chromatin structure through their histone lysine methyltransferase (HMTase) activity. SUVR1, SUVR2 and SUVR4 proteins contain a novel domain at their N-terminus, and a SUVR specific region preceding the SET domain. Localized to the nucleolus, maybe involved in regulation of rRNA expression. C.G. S.X.
0.02 7e-1 36 At1g78310 844166 VQ motif-containing protein F:unknown;P:unknown;C:chloroplast;MPFOVB C.G. S.X.
0.01 7e-1 36 At1g63870 842691 disease resistance protein (TIR-NBS-LRR class), putative F:transmembrane receptor activity, protein binding, nucleoside-triphosphatase activity, nucleotide binding, ATP binding;P:signal transduction, defense response, apoptosis, innate immune response;C:intrinsic to membrane, chloroplast;PMBOFAV C.G. S.X.
0.01 7e-1 36 At1g63450 842651 catalytic F:catalytic activity;P:unknown;C:membrane;POM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.33 5e-24 113 Glycine max GmaAffx.65167.1.S1_at BQ297223 - - 2e-24 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
0.13 9e-8 57 Hordeum vulgare Contig7041_at Contig7041 - - 2e-7 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
0.14 1e-13 79 Oryza sativa Os01g0560000 AY187620.1 - Auxin conjugate hydrolase (ILL5) 2e-4 At1g51780 ILL5 C.G. S.X.
0.36 1e-43 178 Populus trichocarpa Ptp.3067.1.S1_at AJ744954.1 iaa-amino acid hydrolase 11 - 9e-44 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
0.19 3e-6 54 Triticum aestivum Ta.7272.2.S1_a_at BJ260859 auxin amidohydrolase - 1e-6 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
0.10 9e-13 73 Vitis vinifera 1621856_at CF516490 hypothetical protein LOC100251400 - 2e-12 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
0.15 3e-16 85 Zea mays Zm.16472.2.S1_at AI666038 hypothetical protein LOC100274316 - 1e-15 At1g51760 IAR3 (IAA-ALANINE RESISTANT 3) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009611 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating damage to the organism.
C GO:0006508 The chemical reactions and pathways resulting in the breakdown of a protein by the destruction of the native, active configuration, with the hydrolysis of peptide bonds.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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