CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g51620

Gene name protein kinase family protein

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.89 94.6 At1g51620 841587 protein kinase family protein F:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVA S.X. H.G.
0.67 81.6 At4g37770 829933 ACS8 Encodes an auxin inducible ACC synthase. S.X. H.G.
0.60 75.7 At1g30135 839893 JAZ8 (JASMONATE-ZIM-DOMAIN PROTEIN 8) F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P S.X. H.G.
0.46 59.8 At4g26200 828726 ACS7 Member of a family of proteins in Arabidopsis that encode 1-Amino-cyclopropane-1-carboxylate synthase, an enzyme involved in ethylene biosynthesis. Not expressed in response to IAA. S.X. H.G.
0.33 38.1 At5g66620 836794 DAR6 (DA1-RELATED PROTEIN 6) F:zinc ion binding;P:unknown;C:unknown;MOBFPVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
520.8 100.0 E-MEXP-807-raw-cel-1173273116
397.2 100.0 E-MEXP-807-raw-cel-1173273060
312.8 100.0 E-MEXP-807-raw-cel-1173273223
307.9 100.0 E-MEXP-807-raw-cel-1173273170
292.1 100.0 E-MEXP-807-raw-cel-1173273088
232.9 100.0 E-MEXP-807-raw-cel-1173273196
133.2 99.9 GSM134208 Murray_3-4_D7-GROWTH_Rep1_ATH1 GSE5750 Growth of suspension-cultured cells
91.3 99.9 E-MEXP-807-raw-cel-1173273252
67.7 99.9 GSM184537 Whole roots 2hr KCl control treated then frozen, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
66.0 99.8 GSM142851 MG001_ATH1_A4-Torres-2N1 GSE6176 Impact of Type III effectors on plant defense responses
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.04 4e-4 46 At3g46370 823783 leucine-rich repeat protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOBFVA C.G. S.X.
0.02 2e-3 44 At1g05700 837077 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.02 6e-3 42 At5g59680 836089 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.01 6e-3 42 At1g07550 837269 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.01 1e-1 38 At4g29450 829066 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVA C.G. S.X.
0.02 1e-1 38 At1g51800 841606 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.02 4e-1 36 At5g16900 831553 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA C.G. S.X.
0.01 4e-1 36 At3g48050 823960 DNA binding / protein binding / transcription regulator F:protein binding, transcription regulator activity, DNA binding;P:transcription;C:nucleus;MOBFPVA C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 4e-2 40 Glycine max Gma.4297.1.S1_at BM954372 - - 1e-2 At1g51620 protein kinase family protein C.G. S.X.
0.03 5e-2 38 Hordeum vulgare Contig13334_at Contig13334 - - 2e-1 At1g51620 protein kinase family protein C.G. S.X.
Os12g0467600 0.03 3e+0 Oryza sativa Os04g0422400 9631.m05512 - - 2e-1 At5g47100 CBL9 C.G. S.X.
0.06 1e-1 38 Populus trichocarpa PtpAffx.212087.1.S1_at pmrna23712 hypothetical protein - 2e-9 At5g18610 protein kinase family protein C.G. S.X.
0.03 3e-2 40 Triticum aestivum TaAffx.18131.1.S1_at CA606191 - - 4e-2 At1g51620 protein kinase family protein C.G. S.X.
0.04 2e-3 42 Vitis vinifera 1614584_at CB972613 hypothetical LOC100241278 - 4e-3 At1g51620 protein kinase family protein C.G. S.X.
0.03 1e+1 30 Zea mays ZmAffx.910.1.S1_at AI770949 growth-regulating factor 13-like - 3e+0 At5g27910 NF-YC8 (NUCLEAR FACTOR Y, SUBUNIT C8) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006468 The process of introducing a phosphate group on to a protein.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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