CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g51500

Gene name CER5 (ECERIFERUM 5)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.43 55.3 At1g51500 841575 CER5 (ECERIFERUM 5) Encodes an ABC transporter involved in cuticular wax biosynthesis. Lines carrying recessive mutations in this locus have weakly glaucous stem surface, and relative elevated secondary alcohols and ketones. S.X. H.G.
0.60 75.7 At1g68530 843182 KCS6 (3-KETOACYL-COA SYNTHASE 6) Encodes KCS6, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids). S.X. H.G.
0.57 73.8 At4g00360 828019 CYP86A2 (CYTOCHROME P450 86 A2) Encodes a member of the CYP86A subfamily of cytochrome p450 genes. Expressed at moderate levels in flowers, leaves, roots and stems. S.X. H.G.
0.53 68.6 At4g25960 828702 PGP2 (P-GLYCOPROTEIN 2) F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMAFPV S.X. H.G.
0.36 43.6 At3g61550 825328 zinc finger (C3HC4-type RING finger) family protein F:protein binding, zinc ion binding;P:unknown;C:unknown;PMOFV S.X. H.G.
0.27 26.2 At2g26250 817165 KCS10 (3-KETOACYL-COA SYNTHASE 10) epidermis-specific, encodes KCS10, a putative 3-ketoacyl-CoA synthase. probably involved in the synthesis of long-chain lipids found in the cuticle. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
28.9 99.7 E-MEXP-1443-raw-cel-1581869515
22.5 99.6 E-MEXP-285-raw-cel-440783152
20.0 99.6 GSM131191 AtGen_D-24_2-WL_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
19.3 99.6 GSM131206 AtGen_D-40_3-WL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
18.9 99.5 GSM131200 AtGen_D-34_3-FL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
18.7 99.5 E-MEXP-285-raw-cel-440783213
18.2 99.5 GSM131202 AtGen_D-36_3-RL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
17.4 99.5 GSM131203 AtGen_D-37_3-BL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
17.2 99.5 GSM131187 AtGen_D-20_2-RL_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
17.1 99.5 GSM131176 AtGen_D-8_1-WL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.71 0 644 At3g21090 821661 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV C.G. S.X.
0.07 3e-22 107 At3g21080 821660 ABC transporter-related F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.06 7e-8 59 At1g17840 838363 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) Encodes a plasma membrane-localized ATP-binding cassette transporter, that is required for cutin transport to the extracellular matrix. C.G. S.X.
0.11 3e-4 48 At1g51460 841571 ABC transporter family protein F:ATPase activity, coupled to transmembrane movement of substances;P:transport;C:membrane;BOMFAPV C.G. S.X.
0.01 3e-1 38 At1g53380 841774 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PBO C.G. S.X.
0.01 1e+0 36 At5g10200 830884 binding F:binding;P:biological_process unknown;C:plasma membrane;MFPOVB C.G. S.X.
0.01 1e+0 36 At3g49150 824076 - F:molecular_function unknown;P:protein insertion into membrane;C:integral to membrane;PMF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.17 3e-20 101 Glycine max Gma.16610.1.S1_at CD404590 - - 1e-20 At1g51500 CER5 (ECERIFERUM 5) C.G. S.X.
0.04 1e-4 48 Hordeum vulgare Contig11350_at Contig11350 - - 3e-7 At3g21090 ABC transporter family protein C.G. S.X.
0.06 4e-11 71 Oryza sativa Os05g0222200 AK068591.1 - ABC transporter 4e-13 At3g21090 ABC transporter family protein C.G. S.X.
0.39 9e-36 153 Populus trichocarpa PtpAffx.204886.1.S1_at pmrna9652 white-brown-complex ABC transporter family - 5e-46 At1g51500 CER5 (ECERIFERUM 5) C.G. S.X.
0.04 2e-2 42 Triticum aestivum Ta.24551.1.S1_at BQ170196 CER5-like protein - 1e-5 At3g21090 ABC transporter family protein C.G. S.X.
0.15 5e-9 61 Vitis vinifera 1608408_at CF404680 hypothetical protein LOC100267086 - 7e-9 At1g51500 CER5 (ECERIFERUM 5) C.G. S.X.
0.02 5e-7 56 Zea mays Zm.8050.1.A1_at CF244335 ABC transporter C05D10.3 in chromosome III - 2e-19 At1g17840 WBC11 (WHITE-BROWN COMPLEX HOMOLOG PROTEIN 11) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
X GO:0009651 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of salt (particularly but not exclusively sodium and chloride ions) in the environment.
X GO:0009737 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an abscisic acid stimulus.
X GO:0010025 The chemical reactions and pathways resulting in the formation of wax, which includes C16 and C18 fatty acids.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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