Gene omics information

Query gene ID At1g50660
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g50660841488unknown proteinF:unknown;P:biological_process unknown;C:chloroplast;MOBFPAVS.X.H.G.
0.2014.4At1g67140843034SWEETIE (SWEETIE)F:binding;P:trehalose metabolic process, carbohydrate metabolic process, starch metabolic process;C:cytosol;MOBFPVAS.X.H.G.
0.135.8At3g54670824632TTN8 (TITAN8)cohesinS.X.H.G.
0.135.8At5g13020831142emsy N terminus domain-containing protein / ENT domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.114.1At5g08550830755ILP1 (increased level of polyploidy1-1D)Encodes a transcriptional repressor that is homologous to the C-terminal region of mammalian GC binding factor. It regulates endoreduplication through control of CYC2A expression.S.X.H.G.
0.071.9At5g07940830688-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFBPAS.X.H.G.
0.061.4At3g23900821973RNA recognition motif (RRM)-containing proteinF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MOFBPVAS.X.H.G.
0.030.6At5g08390830737-F:molecular_function unknown;P:biological_process unknown;C:CUL4 RING ubiquitin ligase complex;MFOPBAVS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
155.599.9GSM205432Col_ leaf_ wildtype_rep01GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
95.999.9GSM133957Fukuda_1-2_0B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
93.799.9GSM133966Fukuda_1-11_10A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
71.799.9GSM133967Fukuda_1-12_10B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
70.799.9GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
69.799.9GSM205435Col_ leaf_ wildtype_rep02GSE8279Transgenerational Stability of the Arabidopsis Epigenome Is Coordinated by CG Methylation
66.999.8GSM133965Fukuda_1-10_8B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
61.299.8GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
60.099.8GSM133962Fukuda_1-7_6A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
53.099.8GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.550833At3g20350821579unknown proteinF:unknown;P:biological_process unknown;C:plasma membrane;MOFBPAVC.G.S.X.
0.017e-240At5g60040836126NRPC1Encodes a subunit of RNA polymerase III (aka RNA polymerase C).C.G.S.X.
0.013e-138At1g21700838774ATSWI3C (SWITCH/SUCROSE NONFERMENTING 3C)a member of the Arabidopsis SWI3 gene family. Protein physically interacts with ATSWI3B and ATSWI3A, the other two members of the SWI3 family. Homologous to yeast SWI3 & RSC8, components of the SWI/SNF and RSC chromatin remodeling complexes. Referred to as CHB3 in Zhou et al (2003).C.G.S.X.
0.013e-138At1g29300839804UNE1 (unfertilized embryo sac 1)F:unknown;P:double fertilization forming a zygote and endosperm;C:unknown;PBOMFC.G.S.X.
0.011e+036At5g43810834403ZLL (ZWILLE)Encodes a member of the EIF2C (elongation initiation factor 2c)/ Argonaute class of proteins. Required to establish the central-peripheral organization of the embryo apex. Along with WUS and CLV genes, controls the relative organization of central zone and peripheral zone cells in meristems. Acts in embryonic provascular tissue potentiating WUSCHEL function during meristem development in the embryo.C.G.S.X.
0.011e+036At5g64290836550DIT2.1 (DICARBOXYLATE TRANSPORT 2.1)F:oxoglutarate:malate antiporter activity;P:malate transport, response to nematode;C:chloroplast, membrane, chloroplast envelope;BOPAMFVC.G.S.X.
0.011e+036At5g37630833741EMB2656 (EMBRYO DEFECTIVE 2656)F:binding;P:embryonic development ending in seed dormancy, mitotic chromosome condensation;C:cellular_component unknown;MFOPBC.G.S.X.
0.011e+036At3g58110824980unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;OMFPBVAC.G.S.X.
0.011e+036At3g58120824981BZIP61Encodes a member of the BZIP family of transcription factors. Forms heterodimers with the related protein AtbZIP34. Binds to G-boxes in vitro and is localized to the nucleus in onion epidermal cells.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.169e-36153Glycine maxGmaAffx.6166.1.S1_atBU927326--1e-27At3g20350unknown proteinC.G.S.X.
0.034e-859Hordeum vulgareContig11358_atContig11358--4e-2At1g11690unknown proteinC.G.S.X.
0.066e-1377Oryza sativaOs04g0625000CR289623-Hypothetical protein1e-13At3g20350unknown proteinC.G.S.X.
0.037e-1273Populus trichocarpaPtpAffx.209576.1.S1_atpmrna18954hypothetical protein-9e-16At3g20350unknown proteinC.G.S.X.
0.035e-344Triticum aestivumTaAffx.38206.1.S1_atBJ245068--1e+0At2g05440glycine-rich proteinC.G.S.X.
0.076e-961Vitis vinifera1613950_atCF414823hypothetical protein LOC100255542-3e-9At1g50660unknown proteinC.G.S.X.
0.062e-963Zea maysZm.17515.1.S1_atCK370872--4e-9At1g50660unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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