Gene omics information

Query gene ID At1g50610
Gene name leucine-rich repeat transmembrane protein kinase, putative
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g50610841483leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cellular_component unknown;PMOFBVAS.X.H.G.
0.8491.9At2g21480816687protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.8491.9At5g18910832009protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:peroxisome;MPOBFVAS.X.H.G.
0.8391.4At1g02000839289GAE2 (UDP-D-GLUCURONATE 4-EPIMERASE 2)UDP-D-glucuronate 4-epimeraseS.X.H.G.
0.8290.9At2g33460817911RIC1 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 1)encodes a member of a novel protein family that contains contain a CRIB (for Cdc42/Rac-interactive binding) motif required for their specific interaction with GTP-bound Rop1 (plant-specific Rho GTPase). Interacts with Rop1 and is involved in pollen tube growth and function. Protein most similar to RIC3(family subgroup III). RIC1 is localized to the apical region of the plasma membrane in pollen tube and mutation analyses indicate that this localization is dependent on ROP1 binding. Gene is expressed in all tissues examined.Analysis of overexpression and loss of function mutants indicates a role in cortical microtubule organization during pavement cell morphogenesis.S.X.H.G.
0.8290.9At1g25240839107epsin N-terminal homology (ENTH) domain-containing protein / clathrin assembly protein-relatedF:phospholipid binding, clathrin binding, binding, phosphatidylinositol binding;P:clathrin coat assembly;C:clathrin coat, mitochondrion;PMFBAOS.X.H.G.
0.8190.4At2g21540816693SFH3 (SEC14-LIKE 3)F:phosphatidylinositol transporter activity;P:flower development, transport;C:intracellular;MPFOS.X.H.G.
0.8190.4At3g18810821414protein kinase family proteinF:protein serine/threonine kinase activity, protein tyrosine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;OMBPFVAS.X.H.G.
0.8089.8At2g22180816752hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOBVS.X.H.G.
0.8089.8At3g19310821465phospholipase C/ phosphoric diester hydrolaseF:phospholipase C activity, phosphoric diester hydrolase activity;P:intracellular signaling cascade, lipid metabolic process;C:endomembrane system;FPOBMS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
195.6100.0E-MEXP-1138-raw-cel-1432772714
167.4100.0E-MEXP-1138-raw-cel-1432772906
163.799.9E-MEXP-1138-raw-cel-1432772810
155.599.9E-MEXP-1138-raw-cel-1432772778
153.999.9E-MEXP-1138-raw-cel-1432773066
151.799.9E-MEXP-1138-raw-cel-1432772874
150.899.9GSM131637ATGE_73_BGSE5632AtGenExpress: Developmental series (flowers and pollen)
143.599.9E-MEXP-1138-raw-cel-1432772842
138.599.9E-MEXP-1138-raw-cel-1432773130
127.799.9E-MEXP-1138-raw-cel-1432772746
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.495e-58226At3g20190821563leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:unknown;PMOFBVAC.G.S.X.
0.022e-552At5g05160830398leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:cell wall, plasma membrane;PMOBFVAC.G.S.X.
0.021e-346At4g23740828474leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:plasma membrane;PMOBFVAC.G.S.X.
0.044e-344At2g07040815274PRK2APollen receptor kinase. Coexpression of AtPRK2a with AtRopGEF12 resulted in isotropic pollen tube growth.C.G.S.X.
0.042e-242At5g35390833500leucine-rich repeat transmembrane protein kinase, putativeEncodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis.C.G.S.X.
0.022e-242At3g17840821053RLK902Encodes a receptor-like kinase found at the cell surface of various tissues. Its function remains unknown.C.G.S.X.
0.017e-240At2g39110818497protein kinase, putativeF:protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MPOBFVAC.G.S.X.
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Orthologous genes



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HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.021e-450Glycine maxGmaAffx.81701.1.S1_atBG315974--3e-12At5g58300leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.012e+034Hordeum vulgareContig19395_atContig19395--1e+0At1g24060unknown proteinC.G.S.X.
0.012e+036Oryza sativaOs03g08263009631.m06022--4e-2At2g13650GONST1 (Golgi Nucleotide Sugar Transporter 1)C.G.S.X.
0.091e-1069Populus trichocarpaPtpAffx.207458.1.S1_atpmrna14805hypothetical protein-4e-9At3g20190leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.021e+036Triticum aestivumTaAffx.9004.1.S1_atCA616522--1e-6At5g05160leucine-rich repeat transmembrane protein kinase, putativeC.G.S.X.
0.013e-136Vitis vinifera1619978_atCB977451--1e+0At5g50801unknown proteinC.G.S.X.
0.012e+034Zea maysZm.5620.1.A1_atAI649735hypothetical protein LOC100279241-8e+0At5g37600ATGSR1C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
CGO:0006468The process of introducing a phosphate group on to a protein.
CGO:0007169The series of molecular signals generated as a consequence of a transmembrane receptor tyrosine kinase binding to its physiological ligand.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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