CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g50520

Gene name CYP705A27

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.50 65.3 At1g50520 841474 CYP705A27 member of CYP705A S.X. H.G.
0.57 73.8 At1g68150 843143 WRKY9 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.55 70.6 At3g20960 821646 CYP705A33 member of CYP705A S.X. H.G.
0.44 57.2 At1g69810 843317 WRKY36 member of WRKY Transcription Factor; Group II-b S.X. H.G.
0.29 30.3 At2g24610 816997 ATCNGC14 member of Cyclic nucleotide gated channel family S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
324.4 100.0 GSM184551 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep1 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
189.3 100.0 GSM133957 Fukuda_1-2_0B_Rep2_ATH1 GSE5748 In vitro tracheary element transdifferentiation of Col-0 suspension cells.
63.9 99.8 GSM184556 Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
33.5 99.7 GSM184487 Epidermis&Cortex root cells 2hr KCl control treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
30.7 99.7 GSM184552 Whole roots 2hr KCl control treated then incubated in protoplast-generating solution minus enzymes, biological rep2 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
30.4 99.7 GSM231201 chl1 at T0, biological rep3 GSE9148 Expression data of 10-day-old wild-type and chl1-5 plants exposed to 25 mM nitrate for 0h or 0.5h
29.2 99.7 GSM184897 Arabidopsis, root cells, cortex, standard conditions, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
28.5 99.7 GSM142752 MJ001_ATH1_A3-jones-rh1 GSE6165 The effect of mutations in AtrbohC on the pattern of gene expression in primary root tissue.
24.9 99.6 GSM184511 Pericycle root cells 2hr continuous KNO3 treated, biological rep3 GSE7631 Cell-specific nitrogen responses in the Arabidopsis root
24.0 99.6 GSM133892 Schroeder_1-6_JS43-control-96h_Rep1_ATH1 GSE5744 Response to potassium starvation in roots
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.86 0 1287 At1g50560 841477 CYP705A25 member of CYP705A C.G. S.X.
0.13 6e-20 99 At3g20120 821555 CYP705A21 member of CYP705A C.G. S.X.
0.16 2e-16 87 At3g20110 821554 CYP705A20 member of CYP705A C.G. S.X.
0.18 9e-13 75 At5g47990 834850 CYP705A5 encodes a member of the CYP705A family of cytochrome P450 enzymes. It appears to catalyze the addition of a double bond to thalian-diol at carbon 15. Reduced levels of THAD expression lead to a build up of thalian-diol in root extracts. thad1-1 mutants also have longer roots than wild type seedlings. C.G. S.X.
0.19 1e-11 71 At2g05180 815066 CYP705A6 member of CYP705A C.G. S.X.
0.17 6e-11 69 At2g14100 815896 CYP705A13 a member of the cytochrome P450 family C.G. S.X.
0.14 9e-10 65 At3g20080 821548 CYP705A15 member of CYP705A C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 1e+0 36 Glycine max GmaAffx.13148.1.S1_at BF596896 - - 9e-10 At5g57520 ZFP2 (ZINC FINGER PROTEIN 2) C.G. S.X.
0.02 2e+0 34 Hordeum vulgare Contig5226_at Contig5226 - - 1e-1 At1g79790 haloacid dehalogenase-like hydrolase family protein C.G. S.X.
0.02 2e+0 36 Oryza sativa OsAffx.25662.1.S1_at - - - 0 C.G. S.X.
0.03 7e-2 40 Populus trichocarpa PtpAffx.225019.1.S1_at pmrna44032 cytochrome P450 - 1e-2 At2g39590 40S ribosomal protein S15A (RPS15aC) C.G. S.X.
0.02 3e+0 34 Triticum aestivum TaAffx.4918.1.S1_at CA728577 - - 4e+0 At3g49580 LSU1 (RESPONSE TO LOW SULFUR 1) C.G. S.X.
0.02 4e+0 32 Vitis vinifera 1615879_at CB001698 - - 3e-1 At1g72420 - C.G. S.X.
0.02 5e+0 32 Zea mays Zm.9541.1.A1_at BM350357 hypothetical protein LOC100278387 - 6e+0 At5g60400 unknown protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00347 Cytochrome P450

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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