Gene omics information

Query gene ID At1g50500
Gene name HIT1 (HEAT-INTOLERANT 1)
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g50500841472HIT1 (HEAT-INTOLERANT 1)encodes a member of VPS53 family protein involved in the retrograde trafficking of vesicles to the late Golgi. Mutants in this gene are more sensitive to heat and osmotic stress.S.X.H.G.
0.5673.0At3g17900821058unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.5065.3At3g13290820529VCR (VARICOSE-RELATED)F:nucleotide binding;P:unknown;C:cellular_component unknown;MBOFPAS.X.H.G.
0.4963.5At1g76850844020SEC5A (EXOCYST COMPLEX COMPONENT SEC5)F:molecular_function unknown;P:pollen germination, pollen tube growth;C:cytosol, plasma membrane;MFPOVBS.X.H.G.
0.4761.2At1g05520837054transport protein, putativeF:protein binding, transporter activity, zinc ion binding;P:transport, response to salt stress;C:COPII vesicle coat;MFOPS.X.H.G.
0.4761.2At4g38200829976guanine nucleotide exchange family proteinF:binding, ARF guanyl-nucleotide exchange factor activity, guanyl-nucleotide exchange factor activity;P:regulation of ARF protein signal transduction;C:chloroplast;MFOPBS.X.H.G.
0.4659.8At1g59610842251ADL3 (ARABIDOPSIS DYNAMIN-LIKE 3)A high molecular weight GTPase whose GTP-binding domain shows a low homology to those of other plant dynamin-like proteins.Contains a pleckstrin homologous domain.S.X.H.G.
0.4659.8At5g16300831491-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MFPOS.X.H.G.
0.4659.8At4g01290828103unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOFBPS.X.H.G.
0.4457.2At5g11490831021adaptin family proteinF:protein transporter activity, protein binding, binding;P:intracellular protein transport, vesicle-mediated transport, protein transport;C:membrane coat, clathrin adaptor complex;MFOPS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
60.599.8GSM142902WW001_ATH1_A1-WILLA-CONGSE6181Assembly of the cell wall pectic matrix.
45.699.8GSM142904WW002_ATH1_A1-willa-CON-REP2GSE6181Assembly of the cell wall pectic matrix.
41.799.8GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
22.899.6GSM133961Fukuda_1-6_4B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
22.699.6GSM133963Fukuda_1-8_6B_Rep2_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
20.499.6GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
20.399.6GSM133960Fukuda_1-5_4A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
19.299.6GSM133964Fukuda_1-9_8A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
17.199.5GSM133962Fukuda_1-7_6A_Rep1_ATH1GSE5748In vitro tracheary element transdifferentiation of Col-0 suspension cells.
16.699.5E-ATMX-31-raw-cel-1516947916
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.534e-164579At1g50970841519membrane trafficking VPS53 family proteinF:transporter activity;P:transport;C:endomembrane system;MFOPBAC.G.S.X.
0.018e-240At5g64690836590neurofilament triplet H protein-relatedF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.013e-138At5g63830836503-F:molecular_function unknown;P:biological_process unknown;C:chloroplast;MFOPC.G.S.X.
0.013e-138At2g21280816667SULAA nuclear-encoded, plastid-targeted protein (AtSulA) whose overexpression causes severe yet stochastic plastid (shown in chloroplasts and leucoplasts) division defects. The protein does not appear to interact with either AtFtsZ proteins when studied in a yeast two-hybrid system.C.G.S.X.
0.013e-138At1g11800837726endonuclease/exonuclease/phosphatase family proteinF:hydrolase activity, zinc ion binding;P:unknown;C:intracellular;MOPBFC.G.S.X.
0.013e-138At1g04920839382ATSPS3F (sucrose phosphate synthase 3F)Encodes a protein with putative sucrose-phosphate synthase activity.C.G.S.X.
0.011e+036At4g20230827770terpene synthase/cyclase family proteinF:lyase activity, magnesium ion binding;P:metabolic process;C:unknown;PFOC.G.S.X.
0.011e+036At3g23990821983HSP60 (HEAT SHOCK PROTEIN 60)mitochondrial chaperonin HSP. assist in rapid assembly of the oligomeric protein structures in the mitochondria.C.G.S.X.
0.011e+036At2g43360818937BIO2 (BIOTIN AUXOTROPH 2)Catalyzes the conversion of dethiobiotin to biotin.C.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.213e-36155Glycine maxGma.14089.1.S1_atBE554790--5e-37At1g50500HIT1 (HEAT-INTOLERANT 1)C.G.S.X.
0.012e-138Hordeum vulgareContig8776_s_atContig8776--1e+0Atmg00920-C.G.S.X.
0.271e-48196Oryza sativaOs01g0906200AK106369.1-Hypothetical protein8e-7At1g50500HIT1 (HEAT-INTOLERANT 1)C.G.S.X.
0.236e-68260Populus trichocarpaPtpAffx.140354.1.A1_atCV260891hypothetical protein-1e-68At1g50500HIT1 (HEAT-INTOLERANT 1)C.G.S.X.
0.053e-448Triticum aestivumTa.12924.1.S1_atCK157382--2e-4At1g50500HIT1 (HEAT-INTOLERANT 1)C.G.S.X.
0.062e-1273Vitis vinifera1614869_atCF208077hypothetical protein LOC100251847-1e-12At1g50500HIT1 (HEAT-INTOLERANT 1)C.G.S.X.
0.012e+034Zea maysZm.4463.1.A1_atBG266174hypothetical protein LOC100276419-5e-3At1g75110RRA2 (REDUCED RESIDUAL ARABINOSE 2)C.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
XGO:0006970A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.
XGO:0009408A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a heat stimulus, a temperature stimulus above the optimal temperature for that organism.
CGO:0006890The directed movement of substances from the Golgi back to the endoplasmic reticulum, mediated by vesicles bearing specific protein coats such as COPI or COG.
CGO:0006810The directed movement of substances (such as macromolecules, small molecules, ions) into, out of, within or between cells, or within a multicellular organism.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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