CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g49860

Gene name ATGSTF14

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g49860 841409 ATGSTF14 Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). S.X. H.G.
0.89 94.6 At5g37450 833722 leucine-rich repeat transmembrane protein kinase, putative F:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVA S.X. H.G.
0.83 91.4 At1g70880 843425 Bet v I allergen family protein F:molecular_function unknown;P:response to biotic stimulus, defense response;C:cellular_component unknown;P S.X. H.G.
0.83 91.4 At1g08090 837327 ATNRT2:1 (NITRATE TRANSPORTER 2:1) High-affinity nitrate transporter. Up-regulated by nitrate. Functions as a repressor of lateral root initiation independently of nitrate uptake. S.X. H.G.
0.80 89.8 At1g33840 840280 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PF S.X. H.G.
0.78 88.6 At4g08620 826426 SULTR1 High affinity sulfate transporter. Contains STAS domain, essential for sulfur uptake function. Expressed in roots and guard cells. Up-regulated by sulfur deficiency. Down-regulated by cytokinin. Localized to the plasma membrane. S.X. H.G.
0.76 87.4 At1g26250 839166 proline-rich extensin, putative F:structural constituent of cell wall;P:plant-type cell wall organization;C:endomembrane system;MPBOFVA S.X. H.G.
0.71 84.2 At1g11540 837697 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;OBAP S.X. H.G.
0.67 81.6 At4g14630 827113 GLP9 (GERMIN-LIKE PROTEIN 9) germin-like protein with N-terminal signal sequence that may target it to the vacuole, plasma membrane and/or outside the cell. S.X. H.G.
0.67 81.6 At5g59680 836089 leucine-rich repeat protein kinase, putative F:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;PMOBFVA S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
250.1 100.0 E-MEXP-828-raw-cel-1156922708
206.6 100.0 E-MEXP-828-raw-cel-1156922750
197.9 100.0 E-MEXP-828-raw-cel-1156922772
177.4 100.0 E-MEXP-828-raw-cel-1156922829
172.2 100.0 E-MEXP-828-raw-cel-1156922794
160.8 99.9 E-MEXP-828-raw-cel-1156922533
150.8 99.9 E-MEXP-828-raw-cel-1156922846
146.3 99.9 E-MEXP-828-raw-cel-1156922731
142.0 99.9 E-MEXP-828-raw-cel-1156922923
127.2 99.9 E-MEXP-828-raw-cel-1156922944
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.05 3e-5 50 At1g02950 838240 ATGSTF4 (GLUTATHIONE S-TRANSFERASE F4) Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002). C.G. S.X.
0.03 1e-1 38 At5g58070 835919 TIL (TEMPERATURE-INDUCED LIPOCALIN) Encodes a temperature-induced lipocalin TIL1. Involved in thermotolerance. Peripherally associated with plasma membrane. C.G. S.X.
0.01 1e-1 38 At1g77550 844091 protein binding / tubulin-tyrosine ligase F:protein binding, tubulin-tyrosine ligase activity;P:protein modification process;C:chloroplast;MOPFB C.G. S.X.
0.03 4e-1 36 At5g52965 835374 unknown protein F:molecular_function unknown;P:biological_process unknown;C:endomembrane system;P C.G. S.X.
0.02 4e-1 36 At3g09130 820067 unknown protein F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;P C.G. S.X.
0.02 4e-1 36 At1g23820 838993 SPDS1 (spermidine synthase 1) Spermidine synthase. C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.03 5e-1 36 Glycine max GmaAffx.70962.2.S1_at AW100248 - - 4e-12 At5g67420 LBD37 (LOB DOMAIN-CONTAINING PROTEIN 37) C.G. S.X.
0.04 2e-1 36 Hordeum vulgare Contig15951_at Contig15951 - - 1e-1 At2g02930 ATGSTF3 (GLUTATHIONE S-TRANSFERASE F3) C.G. S.X.
0.03 3e+0 34 Oryza sativa OsAffx.22094.1.S1_at - - - 0 C.G. S.X.
0.04 1e-1 38 Populus trichocarpa PtpAffx.60102.1.S1_s_at BU834984 hypothetical protein - 5e-1 At1g23465 signal peptidase-related C.G. S.X.
0.03 2e+0 34 Triticum aestivum Ta.17772.1.S1_s_at CA624223 - - 7e-5 At5g60360 AALP (Arabidopsis aleurain-like protease) C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1613865_at CA818492 - - 3e-3 At2g29525 - C.G. S.X.
0.03 1e+1 30 Zea mays ZmAffx.38.1.A1_at AI657470 - - 2e+0 At4g04423 endo-1,3(4)-beta-glucanase C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
S GO:0009407 The chemical reactions and pathways resulting in the breakdown of toxin, a poisonous compound (typically a protein) that is produced by cells or organisms and that can cause disease when introduced into the body or tissues of an organism.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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