Gene omics information

Query gene ID At1g49750
Gene name leucine-rich repeat family protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.4457.2At1g49750841398leucine-rich repeat family proteinF:protein binding;P:unknown;C:chloroplast;MPBOFVAS.X.H.G.
0.7586.9At1g66970843015SVL2 (SHV3-LIKE 2)F:kinase activity, glycerophosphodiester phosphodiesterase activity;P:glycerol metabolic process, lipid metabolic process;C:anchored to plasma membrane, apoplast, chloroplast, anchored to membrane;BPOMS.X.H.G.
0.7586.9At5g38990833891protein kinase family proteinF:kinase activity;P:protein amino acid phosphorylation;C:endomembrane system;MPOBFVAS.X.H.G.
0.6781.6At2g33530817918scpl46 (serine carboxypeptidase-like 46)F:serine-type carboxypeptidase activity;P:proteolysis;C:plant-type cell wall;PMFOBS.X.H.G.
0.4457.2At1g21270838723WAK2cytoplasmic serine/threonine protein kinase induced by salicylic acid. mutant plants exhibit a loss of cell expansion and dependence on sugars and salts for seedling growth, affecting the expression and activity of vacuolar invertase.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
14.299.4E-ATMX-6-raw-cel-1308219081
11.399.3GSM142798SS001_ATH1_A1-Smith-21AGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
10.399.2GSM142808SS001_ATH1_A11-Smith-21BGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
10.199.2GSM133035CT482-1GSE5684AtGenExpress: Pathogen Series: Response to Botrytis cinerea infection
10.099.2GSM142819SS002_ATH1_A11-smith-24h_repeatGSE6174Gene expression and carbohydrate metabolism through the diurnal cycle
9.499.1GSM131376AtGen_6-5512_Genotoxicstress-Shoots-12.0h_Rep2GSE5625AtGenExpress: Stress Treatments (Genotoxic stress)
9.399.1GSM297380At.StarchSD.WTSS3.SS3R1D4GSE11708Global gene expression in Atss3 mutant and WT over short day diurnal cycle
9.399.1E-ATMX-6-raw-cel-1308219150
8.599.0GSM131122AtGen_B-8_1-1-4_REP_1_ATH1GSE5615AtGenExpress: Response to bacterial-(LPS, HrpZ, Flg22) and oomycete-(NPP1) derived elicitors
8.599.0GSM1330632526GSE5685AtGenExpress: Pathogen Series: Pseudomonas half leaf injection
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.492e-124446At3g19320821466leucine-rich repeat family proteinF:protein binding;P:unknown;C:endomembrane system;PMOBFVAC.G.S.X.
0.021e-242At1g25370839122unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMC.G.S.X.
0.025e-240At2g46780819291RNA binding / nucleic acid binding / nucleotide bindingF:RNA binding, nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;MPFOBAC.G.S.X.
0.017e-136At5g37450833722leucine-rich repeat transmembrane protein kinase, putativeF:protein serine/threonine kinase activity, kinase activity, ATP binding;P:transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation;C:endomembrane system;MPOBFVAC.G.S.X.
0.027e-136At4g29240829045leucine-rich repeat family protein / extensin family proteinF:protein binding;P:biological_process unknown;C:endomembrane system;PMOBFVAC.G.S.X.
0.017e-136At2g18470816362protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, ATP binding;P:protein amino acid phosphorylation;C:chloroplast;MOPBFVAC.G.S.X.
0.017e-136At1g03370839519protein binding / zinc ion bindingF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;MOBFPAVC.G.S.X.
0.023e+034Atmg00010--hypothetical proteinC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.027e-240Glycine maxPsAffx.psZG004xP20f_s_atPsAffx.psZG004xP20f--2e+0At5g03660unknown proteinC.G.S.X.
0.024e-136Hordeum vulgareContig3953_s_atContig3953--5e+0At4g29660EMB2752 (EMBRYO DEFECTIVE 2752)C.G.S.X.
0.022e+036Oryza sativaOs04g0505200AK066703.1-Leucine-rich repeat, plant specific containingprotein1e-7At1g01910anion-transporting ATPase, putativeC.G.S.X.
0.023e-138Populus trichocarpaPtpAffx.46310.1.A1_atCA934504hypothetical protein-1e-1At2g19780leucine-rich repeat family protein / extensin family proteinC.G.S.X.
0.021e-242Triticum aestivumTa.5277.2.S1_atBJ277272--1e+0At5g40260nodulin MtN3 family proteinC.G.S.X.
0.039e-134Vitis vinifera1619795_atCF403136similar to leucine-rich repeat family protein-1e-2At1g62500protease inhibitor/seed storage/lipid transfer protein (LTP) family proteinC.G.S.X.
0.023e-136Zea maysZm.13497.1.S1_atCK368613hypothetical protein LOC100277035-5e-1At1g15840unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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