CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g49660

Gene name AtCXE5 (Arabidopsis thaliana carboxyesterase 5)

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
0.16 8.8 At1g49660 841390 AtCXE5 (Arabidopsis thaliana carboxyesterase 5) Encodes a protein with carboxylesterase whose activity was tested using pNA. S.X. H.G.
0.27 26.2 At1g15100 838073 RHA2A Encodes a putative RING-H2 finger protein RHA2a. S.X. H.G.
0.17 10.2 At2g37170 818293 PIP2B (PLASMA MEMBRANE INTRINSIC PROTEIN 2) a member of the plasma membrane intrinsic protein subfamily PIP2. localizes to the plasma membrane and exhibits water transport activity in Xenopus oocyte. expressed specifically in the vascular bundles and protein level increases slightly during leaf dev S.X. H.G.
0.14 6.8 At1g78660 844202 gamma-glutamyl hydrolase, putative / gamma-Glu-X carboxypeptidase, putative / conjugase, putative The Arabidopsis protein AtGGH1 is a gamma-glutamyl hydrolase cleaving pentaglutamates to yield di- and triglutamates. The enzyme is involved in the tetrahydrofolate metabolism and located to the vacuole. S.X. H.G.
0.07 1.9 At3g01470 821138 ATHB-1 (ARABIDOPSIS THALIANA HOMEOBOX 1) Encodes a homeodomain leucine zipper class I (HD-Zip I) transcriptional activator involved in leaf development. S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
27.1 99.7 GSM131185 AtGen_D-18_2-FL_REP2_ATH1 GSE5617 AtGenExpress: Light treatments
26.0 99.7 GSM131183 AtGen_D-15_1-US_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
24.8 99.6 GSM131170 AtGen_D-2_1-FL_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
24.3 99.6 E-MEXP-1784-raw-cel-1661572965
23.9 99.6 E-MEXP-1112-raw-cel-1590666001
23.4 99.6 GSM131203 AtGen_D-37_3-BL_REP3_ATH1 GSE5617 AtGenExpress: Light treatments
22.1 99.6 GSM184918 Arabidopsis, root cells, endodermis and quiescent center, 140 mM NaCl, replicate 3 GSE7641 Expression analysis of root cell-types after treatment with salt
21.9 99.6 GSM131182 AtGen_D-14_1-AS_REP1_ATH1 GSE5617 AtGenExpress: Light treatments
21.6 99.6 E-MEXP-1784-raw-cel-1661573018
20.9 99.6 E-MEXP-1784-raw-cel-1661572992
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Homologous genes

Paralogous genes

Click Gene ID to show a list of homologous genes.

HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.67 6e-161 567 At1g49650 841389 cell death associated protein-related F:hydrolase activity;P:metabolic process;C:unknown;BOPFMAV C.G. S.X.
0.52 5e-38 159 At1g49640 841388 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPFMAV C.G. S.X.
0.11 2e-21 103 At1g19190 838502 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BOPMFAV C.G. S.X.
0.14 6e-16 85 At3g48700 824031 ATCXE13 (ARABIDOPSIS THALIANA CARBOXYESTERASE 13) F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV C.G. S.X.
0.11 3e-11 69 At2g03550 814884 hydrolase F:hydrolase activity;P:metabolic process;C:cellular_component unknown;BMOPFAV C.G. S.X.
0.12 1e-7 57 At3g48690 824030 CXE12 Encodes a protein with carboxylesterase whose activity was tested using both pNA and 2,4-D-methyl. C.G. S.X.
0.01 5e-1 36 At5g53430 835424 SDG29 (SET DOMAIN GROUP 29) Homology Subgroup III; Orthology Group 2 - A putative histone methyltransferase (predicted to methylate H3K4) related to the Drosophila trithorax group proteins TRX and TRR and the yeast gene SET1. A plant line expressing an RNAi construct directed against this gene has reduced agrobacterium-mediated tumor formation. C.G. S.X.
0.01 2e+0 34 At5g22910 832355 ATCHX9 member of Putative Na+/H+ antiporter family C.G. S.X.
0.01 2e+0 34 At3g19680 821505 unknown protein F:unknown;P:unknown;C:plasma membrane;OPMBF C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.04 1e-2 42 Glycine max Gma.13653.1.A1_at CD402368 - - 2e+0 At5g54531 unknown protein C.G. S.X.
0.03 9e-1 34 Hordeum vulgare HV_CEb0006C16r2_at HV_CEb0006C16r2 - - 1e+1 At5g64680 unknown protein C.G. S.X.
0.02 2e-1 38 Oryza sativa Os07g0169700 9635.m00688 - Gibberellin n b20-oxidase (Fragment) 4e-2 At3g12900 oxidoreductase, 2OG-Fe(II) oxygenase family protein C.G. S.X.
0.03 4e-2 40 Populus trichocarpa PtpAffx.69332.1.A1_at CV261362 hypothetical protein - 2e+0 At5g28610 - C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.65832.1.A1_at BJ219390 - - 3e+0 At5g44270 - C.G. S.X.
0.03 2e+0 32 Vitis vinifera 1622578_at CA812344 - - 1e-3 At5g42300 UBL5 (UBIQUITIN-LIKE PROTEIN 5) C.G. S.X.
0.02 1e+1 30 Zea mays ZmAffx.873.1.A1_at AI770779 - - 5e-2 At4g30460 glycine-rich protein C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0008152 The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00422 Carbohydrate esterases

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
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