CoP: Co-expressed Biological Processes

Gene omics information

Query gene ID At1g49570

Gene name peroxidase, putative

Organism Arabidopsis thaliana

Co-expressed genes

As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF %ile Gene/Probe ID Repr.ID Gene Name Functional Description S.X. H.G. Other DB
1.00 100.0 At1g49570 841381 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB S.X. H.G.
0.89 94.6 At4g33720 829514 pathogenesis-related protein, putative F:molecular_function unknown;P:biological_process unknown;C:endomembrane system, extracellular region;MPFOB S.X. H.G.
0.67 81.6 At5g19890 832111 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:nucleus, cytoplasm;PFOB S.X. H.G.
0.33 38.1 At3g12500 820429 ATHCHIB (ARABIDOPSIS THALIANA BASIC CHITINASE) encodes a basic chitinase involved in ethylene/jasmonic acid mediated signalling pathway during systemic acquired resistance based on expression analyses. S.X. H.G.
0.33 38.1 At4g16260 827320 catalytic/ cation binding / hydrolase, hydrolyzing O-glycosyl compounds F:cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity;P:response to salt stress;C:cell wall, plasma membrane;PO S.X. H.G.
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Specifically expressed experiments

As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX %ile GSM ID Assay Name GSE ID Experiment Title
159.5 99.9 E-MEXP-1468-raw-cel-1591138985
152.9 99.9 E-MEXP-1468-raw-cel-1591139018
137.9 99.9 GSM142728 CH001_ATH1_A007-Hampt-c4b GSE6161 Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
116.5 99.9 GSM179961 Arabidopsis roots, ethylene treatment, replica 2 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
106.7 99.9 GSM179960 Arabidopsis roots, ethylene treatment, replica 1 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
105.7 99.9 GSM179969 Arabidopsis aux1 mutant roots, ethylene treatment, replica 1 GSE7432 Ethylene and auxin interactions in the roots of Arabidopsis seedlings
104.4 99.9 GSM157315 Hammond_3-5_Potassium-starved-root_Rep1_ATH1 GSE6825 Differential gene expression patterns in potassium-starved and Caesium-treated plants
102.9 99.9 GSM142732 CH001_ATH1_A011-Hampt-c4c GSE6161 Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
85.2 99.9 GSM142725 CH001_ATH1_A004-Hampt-c1a GSE6161 Differential gene expression patterns in Arabidopsis mutants lacking the K+ channels, akt1, cngc1 and cngc4.
83.0 99.9 GSM39208 RRE2_C2 GSE2169 rre1 and rre2 mutants
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Homologous genes

Paralogous genes

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HF Ev BS Gene ID Repr. ID Gene Name Functional description C.G. S.X. Other DB
0.05 9e-12 71 At4g16270 827322 peroxidase 40 (PER40) (P40) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
0.03 1e-7 57 At3g50990 824263 electron carrier/ heme binding / peroxidase F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO C.G. S.X.
0.04 2e-6 54 At5g66390 836771 peroxidase 72 (PER72) (P72) (PRXR8) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB C.G. S.X.
0.03 9e-6 52 At4g30170 829140 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOB C.G. S.X.
0.03 9e-6 52 At2g18980 816415 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
0.03 4e-5 50 At4g37530 829908 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to salt stress;C:endomembrane system;PFO C.G. S.X.
0.03 5e-4 46 At5g67400 836876 peroxidase 73 (PER73) (P73) (PRXR11) F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFO C.G. S.X.
0.03 5e-4 46 At5g58390 835952 peroxidase, putative F:electron carrier activity, peroxidase activity, heme binding;P:response to oxidative stress;C:endomembrane system;PFOBM C.G. S.X.
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Orthologous genes

Click Gene ID to show a list of orthologous genes.

HF Ev BS Species Gene ID Repr. ID Gene Name Functional description Ev AGI code Arabidopsis gene name C.G. S.X. Other DB
0.12 8e-7 56 Glycine max GmaAffx.90443.1.S1_s_at CF806168 - - 2e-7 At1g49570 peroxidase, putative C.G. S.X.
0.02 1e+0 34 Hordeum vulgare HS08M08u_s_at HS08M08u - - 1e+0 At1g52580 ATRBL5 (ARABIDOPSIS RHOMBOID-LIKE PROTEIN 5) C.G. S.X.
0.03 2e-2 42 Oryza sativa Os11g0112200 AK108385.1 - Cationic peroxidase 1 precursor (EC 1.11.1.7)(PNPC1) 4e-8 At1g68850 peroxidase, putative C.G. S.X.
0.08 3e-6 54 Populus trichocarpa Ptp.7181.1.S1_at DN488307 hypothetical protein - 2e-6 At1g49570 peroxidase, putative C.G. S.X.
0.03 2e+0 34 Triticum aestivum TaAffx.57784.1.S1_at CA617332 - - 5e-6 At5g67400 peroxidase 73 (PER73) (P73) (PRXR11) C.G. S.X.
0.02 6e-1 34 Vitis vinifera 1609125_at CF373253 hypothetical protein LOC100250703 - 3e-10 At4g15000 60S ribosomal protein L27 (RPL27C) C.G. S.X.
0.03 1e-2 40 Zea mays Zm.404.1.S1_at AF037033.1 anionic peroxidase H - 8e-3 At5g66390 peroxidase 72 (PER72) (P72) (PRXR8) C.G. S.X.
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Biological processes

Click GO ID to show a list of genes that are associated with the GO ID.

ECC GO ID Process Name
L GO:0006979 A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of oxidative stress, a state often resulting from exposure to high levels of reactive oxygen species, e.g. superoxide anions, hydrogen peroxide (H2O2), and hydroxyl radicals.
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Metabolic pathways

Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View ID Link to Kappa-View Pathway Name
00413 Peroxidase, class III

Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY ID Link to KEGG PATHWAY Pathway Name
00360 Phenylalanine metabolism
00680 Methane metabolism
00940 Phenylpropanoid biosynthesis
01061 Biosynthesis of phenylpropanoids
01100 Metabolic pathways
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