Gene omics information

Query gene ID At1g49150
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
1.00100.0At1g49150841338unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PS.X.H.G.
0.020.4At1g32950840189subtilase family proteinF:identical protein binding, serine-type endopeptidase activity;P:proteolysis, negative regulation of catalytic activity;C:endomembrane system;BPOAFMS.X.H.G.
0.010.2At1g31280840016AGO2 (argonaute 2)An Argonaute geneS.X.H.G.
0.010.2At5g20910832215zinc finger (C3HC4-type RING finger) family proteinF:protein binding, zinc ion binding;P:unknown;C:nucleus;PMOFVS.X.H.G.
0.000.0At5g58210835933hydroxyproline-rich glycoprotein family proteinF:molecular_function unknown;P:biological_process unknown;C:unknown;OMFBPVAS.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
512.0100.0E-MEXP-739-raw-cel-1099467384
303.5100.0E-MEXP-739-raw-cel-1099467393
211.3100.0GSM253646Low_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
208.0100.0E-MEXP-739-raw-cel-1099467339
156.499.9E-MEXP-739-raw-cel-1099467375
150.999.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
147.299.9GSM143308Tsu_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
146.799.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
144.599.9GSM143310Tsu_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
134.899.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.053e-342At1g72800843611nuM1-relatedF:nucleotide binding, nucleic acid binding;P:biological_process unknown;C:cellular_component unknown;PBFMOAVC.G.S.X.
0.012e-136At2g34220817983MEE20 (maternal effect embryo arrest 20)F:molecular_function unknown;P:embryonic development ending in seed dormancy, pollen development;C:nucleus;PC.G.S.X.
0.029e-134At5g49500835010signal recognition particle 54 kDa protein 2 / SRP54 (SRP-54B)F:7S RNA binding, mRNA binding, GTP binding;P:SRP-dependent cotranslational protein targeting to membrane, signal sequence recognition, SRP-dependent cotranslational protein targeting to membrane;C:signal recognition particle, signal recognition particle, endoplasmic reticulum targeting;BOAMFPC.G.S.X.
0.019e-134At4g33330829469transferase, transferring glycosyl groupsF:transferase activity, transferring glycosyl groups;P:biosynthetic process;C:endomembrane system;PMFBVOC.G.S.X.
0.029e-134At4g35500829702protein kinase family proteinF:protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding;P:protein amino acid phosphorylation;C:cellular_component unknown;MOFPBVAC.G.S.X.
0.029e-134At4g35350829688XCP1 (XYLEM CYSTEINE PEPTIDASE 1)tracheary element vacuolar proteinC.G.S.X.
0.029e-134At4g08760826445-F:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.048e-238Glycine maxGmaAffx.27137.1.S1_atBM891108--7e-2At1g49150unknown proteinC.G.S.X.
0.042e+032Hordeum vulgareContig8558_s_atContig8558--3e+0At1g49150unknown proteinC.G.S.X.
0.052e+034Oryza sativaOsAffx.23991.1.S1_at---0C.G.S.X.
0.031e+034Populus trichocarpaPtpAffx.207982.1.S1_s_atpmrna15845hypothetical protein-5e-28At1g13580LAG13 (LAG1 LONGEVITY ASSURANCE HOMOLOG 3)C.G.S.X.
0.044e+032Triticum aestivumTaAffx.110461.1.S1_atCA658715--3e+0At1g49150unknown proteinC.G.S.X.
0.031e+032Vitis vinifera1615708_s_atCF605377--4e+0At4g08230glycine-rich proteinC.G.S.X.
0.034e-134Zea maysZm.4323.1.S1_atAY110219.1--2e+0At1g49150unknown proteinC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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