Gene omics information

Query gene ID At1g49030
Gene name unknown protein
Organism Arabidopsis thaliana


Co-expressed genes



As this page just shows up to 10 genes to the query, if you wish to have the complete list of co-expressed genes, click Gene/Probe ID.

VF%ileGene/Probe IDRepr.IDGene NameFunctional DescriptionS.X.H.G.Other DB
0.5469.5At1g49030841326unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOS.X.H.G.
0.4050.8At1g55380841985DC1 domain-containing proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;BOMPFVAS.X.H.G.
0.3846.7At1g66450842963DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POS.X.H.G.
0.3541.6At1g66440842962DC1 domain-containing proteinF:unknown;P:unknown;C:cellular_component unknown;PFOS.X.H.G.
0.3338.1At3g06990819884DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:cellular_component unknown;POMS.X.H.G.
0.3235.7At1g33610840255protein bindingF:protein binding;P:signal transduction;C:endomembrane system;PMOBFAVS.X.H.G.
0.2930.3At4g13130826927DC1 domain-containing proteinF:protein binding, zinc ion binding;P:biological_process unknown;C:chloroplast envelope;PMOS.X.H.G.
0.2726.2At5g01490831754CAX4 (CATION EXCHANGER 4)Encodes a cation/proton antiporter, a member of Low affinity calcium antiporter CAX2 family.S.X.H.G.
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Specifically expressed experiments



As this page just shows up to 10 assays to the query, if you wish to have the complete list of assays that the query gene/probe was specifically expressed, click here.
Std2 GX%ileGSM IDAssay NameGSE IDExperiment Title
341.7100.0GSM184556Whole roots 2hr KNO3 treated then incubated in protoplast-generating solution minus enzymes, biological rep2GSE7631Cell-specific nitrogen responses in the Arabidopsis root
135.099.9GSM253651Ler 1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
122.399.9GSM253650Ler 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
120.899.9GSM143300Ts_genomic_hyb_3GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
114.399.9GSM184537Whole roots 2hr KCl control treated then frozen, biological rep1GSE7631Cell-specific nitrogen responses in the Arabidopsis root
106.699.9GSM253647Col-0 3GSE10039Low_Mo_Arabidopsis_mapping_MOT1
106.299.9GSM143309Tsu_genomic_hyb_2GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
92.499.9GSM143302Ts_genomic_hyb_1GSE6203Rus_etal_High_Na_Arabidopsis_accessions_mapping_HKT1
91.399.9GSM253648Col-0-1GSE10039Low_Mo_Arabidopsis_mapping_MOT1
88.799.9GSM253645High_Mo_seg_pool_Ler_col_F2GSE10039Low_Mo_Arabidopsis_mapping_MOT1
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Homologous genes



Paralogous genes



Click Gene ID to show a list of homologous genes.

HFEvBSGene IDRepr. IDGene NameFunctional descriptionC.G.S.X.Other DB
0.304e-22105At3g18470821376unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOC.G.S.X.
0.266e-1891At3g18460821375unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOC.G.S.X.
0.222e-963At3g18450821374unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOC.G.S.X.
0.043e-136At4g31280829255unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PC.G.S.X.
0.013e-136At1g30680839948toprim domain-containing proteinF:DNA helicase activity, nucleic acid binding, ATP binding;P:DNA replication, DNA metabolic process;C:unknown;OVBMPC.G.S.X.
0.023e-136At1g09640837491elongation factor 1B-gamma, putative / eEF-1B gamma, putativeF:translation elongation factor activity;P:translational elongation;C:plasma membrane;BMOPFAC.G.S.X.
0.011e+034At5g07400830631forkhead-associated domain-containing protein / FHA domain-containing proteinF:hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides, phosphoric diester hydrolase activity, zinc ion binding, nucleic acid binding;P:DNA repair;C:nucleus;MFOPBC.G.S.X.
0.011e+034At5g12180831091CPK17member of Calcium Dependent Protein KinaseC.G.S.X.
0.041e+034At5g35525833517unknown proteinF:molecular_function unknown;P:biological_process unknown;C:cellular_component unknown;PMFOC.G.S.X.
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Orthologous genes



Click Gene ID to show a list of orthologous genes.

HFEvBSSpeciesGene IDRepr. IDGene NameFunctional descriptionEvAGI codeArabidopsis gene nameC.G.S.X.Other DB
0.032e+034Glycine maxHgAffx.16468.1.S1_atCB376345--2e-1At2g15345enzyme inhibitor/ pectinesteraseC.G.S.X.
0.033e+032Hordeum vulgareHW09H22u_atHW09H22u--1e+0At4g13230late embryogenesis abundant domain-containing protein / LEA domain-containing proteinC.G.S.X.
0.037e-136Oryza sativaOs.26810.1.A1_s_at---0C.G.S.X.
0.081e-138Populus trichocarpaPtpAffx.153129.1.A1_atCV268824hypothetical protein-9e-2At1g49030unknown proteinC.G.S.X.
0.041e+034Triticum aestivumTaAffx.43779.1.S1_atBE493051--5e+0At4g40011unknown proteinC.G.S.X.
0.036e+030Vitis vinifera1620842_atCB345023--2e+0At3g15351unknown proteinC.G.S.X.
0.036e-134Zea maysZm.6848.3.S1_atAW562823--5e-12At1g09640elongation factor 1B-gamma, putative / eEF-1B gamma, putativeC.G.S.X.
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Biological processes



Click GO ID to show a list of genes that are associated with the GO ID.

ECCGO IDProcess Name
NGO:0008150Any process specifically pertinent to the functioning of integrated living units: cells, tissues, organs, and organisms. A process is a collection of molecular events with a defined beginning and end.
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Metabolic pathways



Click KaPPA-View ID to show a list of genes that are assigned to the KaPPA-View ID.

KaPPA-View IDLink to Kappa-ViewPathway Name



Click KEGG PATHWAY ID to show a list of genes that are assigned to the KEGG PATHWAY ID.

KEGG PATHWAY IDLink to KEGG PATHWAYPathway Name
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